Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04153 ATGGGAAAATCAAGTACTAGTTTTTCTAAGGGGTTTTGGAAAGAAGGGTTTGGAGTAATAATGAAGAAACTTCAGAAAAGAATAATGATGAAGCAAGGTTATTTTGTGGTGATTGCAACTCAAGGGTGGAAGCCAGAAAGATTTTGTGTTGAGTTGGAATATTTAGATCATCCTGAGTTTGTGAAATTGTTGAAACAAGCTGAAGAAGAGTTTGGATTCTCTCAGGATGGAGCTATTGCTATACCTTGTGAACCTGATGAGTTGAAGAGAATCATTGGAAGGAAAAAACATTGCATAAATATCAAGGGTATTGATATTACTTGTTAG 327 0.3517 MGKSSTSFSKGFWKEGFGVIMKKLQKRIMMKQGYFVVIATQGWKPERFCVELEYLDHPEFVKLLKQAEEEFGFSQDGAIAIPCEPDELKRIIGRKKHCINIKGIDITC 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04153 108 Pfam Auxin responsive protein 29 92 IPR003676 GO:0009733
Vivi6g04153 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04153 Vivi-Chr6 140509214 140509540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04153 32 92 Calmodulin-binding Proteins AT2G24400 42.623 1.05e-10 53.9