Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04111 ATGCCGATCAGAAACATCGCCGTCGGAACTCCTCAAGAGGCCACTCACCCTGACACCTTGAAAGCCGGTTTGGCTGAGTTCATCTCCACCTTCATCTTCGTCTTCGCCGGTTCAGGTTCCGGTATCGCATACAACAAGCTTACCGACAACGGTGCCGCCACTCCCGCCGGTCTCATCTCCGCTTCCATAGCACACGCATTCGCTCTCTTTGTTGCTGTCTCCGTCGGTGCTAACATCTCCGGTGGACACGTCAACCCCGCCGTCACCTTCGGTGCTTTCGTTGGTGGAAACATCACCTTGCTCCGTGGTATTGTTTACATCATCGCTCAACTCCTCGGATCCATCGTCGCCTCCGCACTCCTCCTCTTCGTCACCGCATCGTCTGTTCCAGCATTCGGTCTATCCGCAGGAGTTGGAGTGGGACCCGCTTTGGTGTTGGAGATTGTGATGACTTTCGGTTTGGTGTACACTGTGTATGCTACAGCCGTTGACCCCAAGAAGGGTAATATTGGAATTATCGCACCTATTGCTATTGGTTTCATCGTTGGTGCTAACATTTTGGTTGGTGGAGCCTTCACCGGAGCATCCATGAACCCCGCCGTGTCATTCGGGCCTGCCGTTGTGAGCTGGAGCTGGGCCAACCACTGGATCTACTGGGTCGGCCCACTTGTCGGTGGTGGTATTGCGGGGCTTGTCTATGAGGTTCTTTTCATTAACAGCACCCATGAGCAGCTTCCAACCACTGACTACTAG 753 0.5432 MPIRNIAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTDNGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLLFVTASSVPAFGLSAGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWANHWIYWVGPLVGGGIAGLVYEVLFINSTHEQLPTTDY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04111 250 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
Vivi6g04111 250 NCBIfam MIP family channel protein 25 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g04111 250 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g04111 250 SUPERFAMILY Aquaporin-like 13 245 IPR023271 -
Vivi6g04111 250 FunFam Probable aquaporin TIP1-1 4 250 - -
Vivi6g04111 250 Pfam Major intrinsic protein 14 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g04111 250 PANTHER AQUAPORIN-8 6 245 IPR034294 -
Vivi6g04111 250 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g04111 250 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g04111 250 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g04111 250 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g04111 250 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g04111 250 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g04111 250 ProSitePatterns MIP family signature. 83 91 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04111 Vivi-Chr6 139681848 139683114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04111 1 250 Major Intrinsic Protein MIP AT2G36830 80.080 4.23e-143 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04111 K09873 - gmx:100527509 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04111 6 139681848 139683114 Vivi6g04111 6 139681848 139683114 ECH