Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi6g04080 | ATGGATGCATCCGTGAAGCCAGAATCGGAATCTAGAACCGGTTTGCTTGATCAGGAAATGCCAGCGGTGAATGGTTGCATTGTTTACACTCGAGGCAAAAGGTCTCTCAATCCGTGTAATGGTTTTTCCGAGGACGTTGATTGCAAGAGATTCAGGGAAGATGCGGAGACGCCGATTGAGTTGGAGAATGGAGTTGATTGTTGCACGGGGAGTAGAGATGATGGCGAGTGTGGTGATGCGATGAAGAGTGAGGTTCGTGAGGTTGCGGAAACGGCGGTCAAGCGGATTACGAGATCGGCGATGAAAGCGGAAGTTGAGTCCAGTAAGGTGCCGGTAAGGAGTTTCAAGCGGATTACACGATCTGCTATGAAAACGAAAGTTGAGTCCGATGGGAAGACGGTGAATGTGTTAGAACAAAGTGGTGCTGCAGTTGGTGCGGTGCCAGTGAGAAATTTGAAGCGGTTTACACGTTCAGCAATGAAAGAAAAGGTTGAGTCTCGTGAAGAGACTGTGAATGTGGTAGAACAACAAGGTGCTGCAGATGTAAGTGGTAAAGGCGATTGTGTGGTGCCAGTGAGAAATTCGAAGCGGCTTACACGTTCAGCTATGAAAGAAAAGGCTGAGTCTCGTGAAGAGACTGTGAATGTGGTAGAACAATTAGGTGCTGCAGATGTAAGTGGTAAAGGCAATGGTGTGGTGCAGGTGAGAAATTCGAAGCGGTTCACACGCTCAGCAGTGAAAGAAAAGGCTGAATCCTGTGAAGAGACGGTTACTGTTGTAAAACAACAAGGTGATGCAGTTGTAAGTGGTAAAAGCAATGGTGCAGTGCCAGTGAGAAATTTGAAACGGTTTACACGTTCAGCAATGAAAGAAAAGGGTGAGTCCTATGAGGAGACGTTGGCTGTGGTAAAACAACAAGATGCTGCAGTTGTAAGTGGCAAAGGCAATGATGGCCATGTGGTGCCAGTGAGAAATTTGAAGCGGTTTACACGATCAGCAATGAAAGAAAAGGCTGAGTCCTGTGAAGAGACACTCAATGTGGTAGAACAACAAGGTGCTGCAGTTGTAAGTGGTAAAGACAATGGTACGGTGGGGATGTTCAAGCGGTTTACCCGATCGGCGGGGAAAGTGACGGCTGAATCCGGTGAGGAGACAGTGACTGAGTTAGAACAGCAGGGTGCTGCCGTTGCAAGTGGTGAAGGTTCAGTGAGGATGTTCAAGCGGATTACACGATCAGCTTCCATGAAAGCAAATCCTGAGTCCGGTGAGGAAACAGTGACCAAGTTAGAAAAAAAAAGGGCCGCCGTTGTGGGTAATATCAATGGTGTGTTAGCTGCTCCGAGAAACAAGATGGAGTTGAAGATGTCAAAGAAGATTGTGGTTAATAAGAAGCCTACAACAGTCAAAGAGCTCTTGCATACCGGATTACTTGATGGCATCTCTGTGGTTTACGTTGGCGGCCTCAAGAAGGCACTAGGATTAAAGGGTGTTATAAGTAATGGGGGAATATTGTGCTCGTGCTGTCTCTGTAAAGGAAGCAGGGTTATTCCACCTTCCCAATTTGAGATCCATGCTTGCAAACAATATAAGAGAGCAGTAGAGTATATATGCCTTGAAAATGGGAAGAGCCTGCTTGATCTGTTGAGAGCGTGCAGGAGAGCTCCCCTGCATGATTTGGAGGCAACAATTCAAAATTTTGTTCGCTCTCCACCCGAGGAAAAATATTTTACTTGTAAAAGGTGCAAAGGATGTCTCCCTTCTTCTTGTATGGAAAGAGCGGGACCTATATGCTCTTCTTGTGCAGAATCATGTAAACCTGAAGAAAGCTCGAAGAATGTAGTTGGCAAAAGAGTCAGGTCCCCTAGGCCAGTGTTGGTCTCCAAGTCATCCTGTGCTACTGAGCTGTCAATTTCTTCAAAAAGTAAGAGACATGGGAAGAAAAGAACAAAGTCATCAAAAAGGGACAACAGCTCAAATTCTTCCAAGAGTGCTTCTGTGCCTATTCTACCCCAGAAGAAAATTACTCTGAAGACGAAAAAGAATGTTATTACCAGGTCACTCTCCGTAAAGTTGAAGACCACTTCAAATTGTTTATCGAAGAGTCAATTGAAGATAACTAAGAAGGATTTTCGGTTGCACAAGTTAGTTTTTGAGGAAAATGGATTGCCTGATGGAACTGAAGTAGCTTATTATGCAGGCGGACAGAAATTGCTTGAAGGTTTCAAAATGGGCTCTGGAATTTTGTGTAGATGTTGCAACACTGAGATCAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCTCGCAAGAAACCTTATGCATACATTTACACATCAAATGGGGTGTCTCTCCATGAATTATCAATATCGCTCTCCAAGGACCGAAAATACTCTGCAAAGGACAATGATGATTTATGCGTTGTTTGTTGGGATGGTGGAAATCTGTTGCTTTGTGATGGATGCCCAAGAGCATTTCATAAAGAATGTGCATCTATATCAAGTATTCCACGTGGTGACTGGTACTGTCAATTTTGCCAAAACATGTTCCAGAGAGAAAAGTTTGTCGCATACAATAACAATGCTTTTGCTGCTGGAAGAGTTGAAGGAGTTGATCCTATTGAGCAAATCACCAAGAGATGCATTCGCATAGTCAAAGACATTGATGCTGAGCTTAGTGGGTGTGCTTTATGCAGGGGTGTTGACTTCAGCAGGTCTGGCTTTGGTCCACGTACAATAATACTGTGTGATCAGTGTGAAAAGGAGTATCATGTTGGCTGTTTGGGGGATCACAAGATGGCATTTCTAAAGGAATTGCCAAAAGGTAACTGGCTTTGCAGCGATGATTGCAAGAGAATACATTCTACTTTGGAGAATGTTTTAGTTAGAGGGGCTGAGAGACTCCCTCAGTCTCTCTTGTCTGTTATAGAGAAAAAGCATGGAGAAAAAGGATTGGATCCCATCAATGATATTAATGTGAGTTGGAGGCTTCTTAGTGGAAAAAATGCTTCTCCTGAAACTAGACCATTGCTTTTGGAGGCTGTCTCTATCTTTCATCAATGCTTTGATCCTATAGTTGATGAAGCCAGCGGACGCGACCTTATTAGAGCAATGGTTTATGGAAAGAGTGTGCGGGGTCAAGAATTTAGAGGAATGCATTGTGCATTACTAATAGTCAATTCATCTGTGGTATCTGCCGGCATGCTTCGAATCTTCGGCACTGATATTGCCGAACTTCCTTTAGTTGCAACAAGTAACAGTCATCATGGGAAGGGCTACTTCCAAGCACTCTTCTCCTGCATCGAACGGCTACTGGCTTTTATGAAAGTAAAGAATCTTGTGCTACCAGCTGCAGAAGAAGCACTGTCCATATGGACAGATAAATTTGGGTTTAGCAAGATTAAACCAGACGAGCTTGCCAGCTACAGAAGGAACTGCAACCAATTTGTGAACTTCAAAGGGACAAATATGCTTCATAAAATGGTGCCTCCATGTCGAATCATCAATAATCAACCCCCACAAATTTTTATCGAGAAAAAGTCAATCATGGAAGCGGAAACCTCGTAG | 3567 | 0.4415 | MDASVKPESESRTGLLDQEMPAVNGCIVYTRGKRSLNPCNGFSEDVDCKRFREDAETPIELENGVDCCTGSRDDGECGDAMKSEVREVAETAVKRITRSAMKAEVESSKVPVRSFKRITRSAMKTKVESDGKTVNVLEQSGAAVGAVPVRNLKRFTRSAMKEKVESREETVNVVEQQGAADVSGKGDCVVPVRNSKRLTRSAMKEKAESREETVNVVEQLGAADVSGKGNGVVQVRNSKRFTRSAVKEKAESCEETVTVVKQQGDAVVSGKSNGAVPVRNLKRFTRSAMKEKGESYEETLAVVKQQDAAVVSGKGNDGHVVPVRNLKRFTRSAMKEKAESCEETLNVVEQQGAAVVSGKDNGTVGMFKRFTRSAGKVTAESGEETVTELEQQGAAVASGEGSVRMFKRITRSASMKANPESGEETVTKLEKKRAAVVGNINGVLAAPRNKMELKMSKKIVVNKKPTTVKELLHTGLLDGISVVYVGGLKKALGLKGVISNGGILCSCCLCKGSRVIPPSQFEIHACKQYKRAVEYICLENGKSLLDLLRACRRAPLHDLEATIQNFVRSPPEEKYFTCKRCKGCLPSSCMERAGPICSSCAESCKPEESSKNVVGKRVRSPRPVLVSKSSCATELSISSKSKRHGKKRTKSSKRDNSSNSSKSASVPILPQKKITLKTKKNVITRSLSVKLKTTSNCLSKSQLKITKKDFRLHKLVFEENGLPDGTEVAYYAGGQKLLEGFKMGSGILCRCCNTEISPSQFEVHAGWASRKKPYAYIYTSNGVSLHELSISLSKDRKYSAKDNDDLCVVCWDGGNLLLCDGCPRAFHKECASISSIPRGDWYCQFCQNMFQREKFVAYNNNAFAAGRVEGVDPIEQITKRCIRIVKDIDAELSGCALCRGVDFSRSGFGPRTIILCDQCEKEYHVGCLGDHKMAFLKELPKGNWLCSDDCKRIHSTLENVLVRGAERLPQSLLSVIEKKHGEKGLDPINDINVSWRLLSGKNASPETRPLLLEAVSIFHQCFDPIVDEASGRDLIRAMVYGKSVRGQEFRGMHCALLIVNSSVVSAGMLRIFGTDIAELPLVATSNSHHGKGYFQALFSCIERLLAFMKVKNLVLPAAEEALSIWTDKFGFSKIKPDELASYRRNCNQFVNFKGTNMLHKMVPPCRIINNQPPQIFIEKKSIMEAETS | 1188 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi6g04080 | 1188 | SUPERFAMILY | FYVE/PHD zinc finger | 794 | 852 | IPR011011 | - | |
| Vivi6g04080 | 1188 | PANTHER | AUTOIMMUNE REGULATOR | 195 | 1161 | - | - | |
| Vivi6g04080 | 1188 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 1050 | 1136 | IPR016181 | - | |
| Vivi6g04080 | 1188 | SMART | PHD_3 | 894 | 951 | IPR001965 | - | |
| Vivi6g04080 | 1188 | SMART | PHD_3 | 806 | 847 | IPR001965 | - | |
| Vivi6g04080 | 1188 | MobiDBLite | consensus disorder prediction | 635 | 666 | - | - | |
| Vivi6g04080 | 1188 | Coils | Coil | 331 | 351 | - | - | |
| Vivi6g04080 | 1188 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 792 | 890 | IPR013083 | - | |
| Vivi6g04080 | 1188 | ProSitePatterns | Zinc finger PHD-type signature. | 807 | 846 | IPR019786 | - | |
| Vivi6g04080 | 1188 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 891 | 953 | IPR013083 | - |
Showing 1 to 10 of 18 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi6g04080 | - | - | psat:127125742 | 1994.16 |
Showing 1 to 1 of 1 entries