Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04072 ATGGAGATATTCAAGCTCATGCTACCAACACAATACAAGGTAAGCCACTTGTTTTCTAAATATAATTCAATTGTATTCCTTCCTAGGATGGGACATCAAATCAGAGAGATTAGTCACAAATTGGATAAGAAAGCAGCTGAGGGGAAAACGTATGGACTTACAACTATTCCCGAACTTGTTGTGCAAGAAAGAGAATTGACTTATCCTGACGTTAATGTTTCAAGAGTAATAGGAAGGGATAATGATAAAGATAAAATTATCCGGCTTTTGATGCAACCTTTTCCTCAGGGTGGAAATGATAAAAGCATGTGTGTCATTCCCATTGTGGGAATGGGAGGATTAGGGAAGACCACTCTTGCAAAGTTGGTGTTCAATGATAAAAGACTGGATCAGCTTTTCCAATTGAAGATGTGGGTGTGTGTCCCTCTTAATTTTGACATCAAGCAGATAATCATTCAAATCATCAACTCTGCCAGTACTGCAGATTCTAAAGCAGCTTCAGCTCCATTGCCCGGTCTCGCTCCTCAAGAGAACATTGACAGCTTAGATATTGTGCAGCTAGTAAGTCGTTTGAAACAAAAACTTTCTGGTCAAAAGTTTTTACTTGTGTTAGATGACATATGGAACGACGACCGTGAAAAGTGGGTTGAGTTGGAAGATTTGATAAAAGTTGGCATACCAGGAAGCAAAATTATGGTGACCACACGTAGTATATCAATTGCTTCGATGATGGGTAATGTTCCCTCATATGAATTAAATGGTCTTTCTTTAAAGGATTGTTTATCTCTATTTGTCAAATTCGCATTCAAGGATGGGGAAGAAAAAATATATCTAAATCTAATGGAGATTGGAAAAAAAATTGTGAAAAAATGTCATGGGGTTCCACTGGCCGTGAAAACATTAGGAAGTTCTCTCTTCTCAAACTTTGATATAAATAAGAGGGAATTTGTTAGGGACTCTGAGATGTGGAATTTAGAACAAAAAAAAGACGGTATTTTACCTGCTCTTAAAGTAAGTTATGATCAAATGTCATCCATTCTAAGACAATGTTTTGTTTATTTTTCCCTCTATCCCAAAGATCATATCTTTAATAGTCTTACATTGTGTGATCTTTGGGTAGCCCTTGGATTAGTTCAATCCCGAAATGGAAGAGAAAAGCTAGAGCATGTTGCAAGAAAATATATTGATGAGTTACGTTCAAGATCATTTCTTCAGGATGTCAATGACTTTGGATTCTTTTGCCAGTTCAAAGTACATCATTTGATACACGATCTTGCATTATATGTTGCAGGAGAGGACTTTGTGGCGGTAAAATCACAAACTCGTAATATACCTCATCAAGCAAGGCATTTGTCATTTGTTGTTGAAGATAAGTCATTTGGTCATGCTTTGTTCCCAGAGTCTAGAAGTGTGAGAAGCATACAATTTCCCATCTCAGGAATGGGTCTTGAGAGTGAAAGTTTTCTGAATACATGGCTGTCAAAGTACAAATGCTTGCGTTATTTAGATTTAAGTGACTCTTCTTTTGAAAATATGCCCAATTCAATTGCAAAATTAGAGCACCTGCGTGGTCTTGATCTTTCTTGTAATCACAAAATCAGAACACTACCAAATTCCATTTGTGAACTTCTAAATTTGCAAGTTTTGTCGTTTGACGGATGCACAGAGCTTGAAAAATTGCCCAAAGGATTAGGAAAGTTGATTAGCCTCCGAAGTCTGGCTGTCACTACAAAACAATCTATTCTTCCATATTATGAATTCGCTAGCTTGAACAATCTTCAAACTTTGGCTTTTCAGGATTGTGTCAATCTGAAGTTTTTGTTCAAAGAACCACTCCCTTCTGTTGAAGAACTGAATTGTAAATCATGTGAGAGCCTGGAGCGCTTACCTCTTGATACTTTTCCTAACTTACAGACATTGCTTATTGATGATTGTCAGATGTTAAACTTGTCATTGGACAATGAAAACTCAATCCAAAAGCTGCGGATGAAAAATTTGTATCTTAGTGATTTTCCAAAGCTTCTAACACTCCCTCGATGGATTGCAAGGGCCGTGGACACTTTAGAGACCTTTATAGTTCTCAATTTTCCTAATCTTCAAATGCTTCCTGGGTATCTTACTACAATGACTCTTCTTAAGAGGATCTATATTGGTAGTTGTTCTAAACTGTTGAGTCTTCCAAGTGGCTGGGATCGCCTCACTGTACTTGAAGTTTTATTCATACATGATTGTCCTGAACTGTACCGAAAATGTCAGCCTCATTCTGGTGAGTACTGGCCCATGATTTGTCATATTAAAAACCTTCACATTGAAGAAAGAGAGGAGGAGGAGGAGGAATGA 2340 0.3739 MEIFKLMLPTQYKVSHLFSKYNSIVFLPRMGHQIREISHKLDKKAAEGKTYGLTTIPELVVQERELTYPDVNVSRVIGRDNDKDKIIRLLMQPFPQGGNDKSMCVIPIVGMGGLGKTTLAKLVFNDKRLDQLFQLKMWVCVPLNFDIKQIIIQIINSASTADSKAASAPLPGLAPQENIDSLDIVQLVSRLKQKLSGQKFLLVLDDIWNDDREKWVELEDLIKVGIPGSKIMVTTRSISIASMMGNVPSYELNGLSLKDCLSLFVKFAFKDGEEKIYLNLMEIGKKIVKKCHGVPLAVKTLGSSLFSNFDINKREFVRDSEMWNLEQKKDGILPALKVSYDQMSSILRQCFVYFSLYPKDHIFNSLTLCDLWVALGLVQSRNGREKLEHVARKYIDELRSRSFLQDVNDFGFFCQFKVHHLIHDLALYVAGEDFVAVKSQTRNIPHQARHLSFVVEDKSFGHALFPESRSVRSIQFPISGMGLESESFLNTWLSKYKCLRYLDLSDSSFENMPNSIAKLEHLRGLDLSCNHKIRTLPNSICELLNLQVLSFDGCTELEKLPKGLGKLISLRSLAVTTKQSILPYYEFASLNNLQTLAFQDCVNLKFLFKEPLPSVEELNCKSCESLERLPLDTFPNLQTLLIDDCQMLNLSLDNENSIQKLRMKNLYLSDFPKLLTLPRWIARAVDTLETFIVLNFPNLQMLPGYLTTMTLLKRIYIGSCSKLLSLPSGWDRLTVLEVLFIHDCPELYRKCQPHSGEYWPMICHIKNLHIEEREEEEEE 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04072 779 Gene3D - 334 427 IPR036388 -
Vivi6g04072 779 Gene3D Ribonuclease Inhibitor 440 772 IPR032675 -
Vivi6g04072 779 FunFam Probable disease resistance protein At1g63360 340 428 - -
Vivi6g04072 779 PANTHER DISEASE RESISTANCE PROTEIN RP 30 721 IPR044974 GO:0006952
Vivi6g04072 779 Pfam NB-ARC domain 82 308 IPR002182 GO:0043531
Vivi6g04072 779 PRINTS Disease resistance protein signature 194 208 - -
Vivi6g04072 779 PRINTS Disease resistance protein signature 291 305 - -
Vivi6g04072 779 PRINTS Disease resistance protein signature 105 120 - -
Vivi6g04072 779 PRINTS Disease resistance protein signature 517 533 - -
Vivi6g04072 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 353 IPR027417 -
Vivi6g04072 779 Gene3D - 63 247 IPR027417 -
Vivi6g04072 779 SUPERFAMILY L domain-like 408 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04072 Vivi-Chr6 138341342 138343708 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04072 106 747 WRKY Transcription Factor Family AT5G45050 23.597 1.74e-14 75.9