Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04039 ATGACGGGTACTAATCAAATCAGCCCCAGTGAATCCAGGAGTGTTGTTCCTTTGAATACCTATGTACTAATTTCAAATTTCAAGCTTGCTTACAATCTTCTCCGACGAGCAGATGGAACATTCAACCGAGATTTAGCAGAGTTTCTCGACAGGAAAGTGCCGGCAAACGCGGTTCCCGTCGACGGGGTATTCTCATTCGATCATGTAGATCGAAACACCGGTCTATTCAATCGAGTTTATCTACCGTCTTCGGTGAATGAATCTCAATGGGGTGTTATAGATTTAGAGAAGCCATTGAGCACAACAGAGATTGTTCCTGTTATAATATTCTTCCATGGAGGAAGCTTCTCTCATTCATCAGCAAACAGTGCAATCTACGACACGTTTTGCAGAAGACTGGTAAGCCTCTGTAAAGCCGCGGTTGTTTCGGTTAATTACCGACGCTCCCCGGAGCATCGGTTTCCATGTTGTTATGAAGACGGTTGGAATGCACTCAAATGGGTGAAATCGAGAAAATGGCTTCAAAGTGGGGTGGAAAAGAATGTCCATGTTTATATGGCGGGTGATAGTTCAGGTGGGAATATAGTTCATCACGTAGCAGTGAAAGCCTCTGAGGAGAAAATCGATGTTTTGGGGAACATTCTTCTTCATCCATTGTTTGGTGGTGAAAAGAGAACAGATTCTGAGATTAGATTAGATGGAAAGTACTTTGTTAGATTGCAAGACCGTGATTGGTATTGGAGAGCTTTTTTACCAGAAGGTGAAGATAGAGACCATCCAGCTTGTAACCCGTTTGGCTCTAAAGGGGTAAAGAATCTAAAAGGACTTAACCACTTTCCCAAAAGTCTTGTTTGTGTTGCTGGTTTGGATCTTTTGCAAGATTGGCAATTGGCTTATGTGGAAGGTTTGAGGAAGTTTGGTCAAGAGGTTAAACTTCTTTACCTTAAGGAGGCTACTATTGGTTTTTACTTCTTGCCTAATAATGATCATTTCTATTGCCTTATGGAGGAGATCAAGAACTTTGTTAATCCTAATTGTTAA 1041 0.4159 MTGTNQISPSESRSVVPLNTYVLISNFKLAYNLLRRADGTFNRDLAEFLDRKVPANAVPVDGVFSFDHVDRNTGLFNRVYLPSSVNESQWGVIDLEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSLCKAAVVSVNYRRSPEHRFPCCYEDGWNALKWVKSRKWLQSGVEKNVHVYMAGDSSGGNIVHHVAVKASEEKIDVLGNILLHPLFGGEKRTDSEIRLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGSKGVKNLKGLNHFPKSLVCVAGLDLLQDWQLAYVEGLRKFGQEVKLLYLKEATIGFYFLPNNDHFYCLMEEIKNFVNPNC 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04039 346 SUPERFAMILY alpha/beta-Hydrolases 58 343 IPR029058 -
Vivi6g04039 346 FunFam Gibberellin receptor GID1 1 344 - -
Vivi6g04039 346 Gene3D alpha/beta hydrolase 1 343 IPR029058 -
Vivi6g04039 346 Pfam alpha/beta hydrolase fold 108 323 IPR013094 GO:0016787
Vivi6g04039 346 PANTHER ARYLACETAMIDE DEACETYLASE 43 317 - -
Vivi6g04039 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Vivi6g04039 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04039 Vivi-Chr6 137860155 137861945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04039 1 343 Carbohydrate Esterase AT3G63010 72.965 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04039 K14493 - gmx:100788435 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04039 6 137860155 137861945 Vivi6g04039 6 137860155 137861945 ECH
Vivi6g04039 6 137860155 137861945 Vivi1g05201 1 112855231 112858009 ECH
Vivi6g04039 6 137860155 137861945 Vivi1g05201 1 112855231 112858009 PCT