Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03966 ATGCCAACAACACTAAGAACAAGTAGAAGAAACAACCTCAAACGCCTCAATTACCTATGTTTCTCAACTTTCATACAACCTCAATCTCCTCCTACAAAATCTCTTCTCCAACAAAAACAACACCAAACTGATCCTAACCGTCCATCACTCTCCACAGATACCTCCACCTCCACCGCCACGTCATCAATCATGATTAAAAACTTCAACACTCTCTACCACAACCACCACTACACCACCTCCCCCGAACCTAACTCCGAACCAGAACCTCAACCCGCCGACTTCGCCACCGCCTTCGCCTCCAACCGCTTCTTCTTCTCCTCCCCCGGCCGCTCCAACTCCATCGTCGAATCCACCTCCTCATGCTCCTCCTCCTCCTCCTCTTCATTAATCACCACCGCTCCGTCCGACAAAAAGAAACCAATTTTTACCGGAAGCGTCGCCGTGCCAACATACTCGCCGGATCCTTACCACGATTTCCGACGGTCAATGCAAGAGATGGTTGAAGCGCGACCGGAGTTGATGAACGACGTGAAATCAAATTGGGATACATTACACGAGCTTCTTCTCAGCTATCTTGCGCTTAACCCCAAGAGCACACACAAATTCATTCTCGGTGCTTTCTCTGATCTCATCGTTACTCTCATGTCATTCTCTTCTTCAAATTCTTCTTGTTCATATCCACCGCCGCCGTCGCAGATTCCCAACAATGGTCGTGGCCGTGGCGGTGGTTGTTAG 735 0.4939 MPTTLRTSRRNNLKRLNYLCFSTFIQPQSPPTKSLLQQKQHQTDPNRPSLSTDTSTSTATSSIMIKNFNTLYHNHHYTTSPEPNSEPEPQPADFATAFASNRFFFSSPGRSNSIVESTSSCSSSSSSSLITTAPSDKKKPIFTGSVAVPTYSPDPYHDFRRSMQEMVEARPELMNDVKSNWDTLHELLLSYLALNPKSTHKFILGAFSDLIVTLMSFSSSNSSCSYPPPPSQIPNNGRGRGGGC 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03966 244 MobiDBLite consensus disorder prediction 221 244 - -
Vivi6g03966 244 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 41 214 IPR038933 GO:0045892
Vivi6g03966 244 ProSiteProfiles OVATE domain profile. 148 213 IPR006458 -
Vivi6g03966 244 Pfam Transcriptional repressor, ovate 152 214 IPR006458 -
Vivi6g03966 244 NCBIfam uncharacterized plant-specific domain TIGR01568 146 215 IPR006458 -
Vivi6g03966 244 MobiDBLite consensus disorder prediction 30 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03966 Vivi-Chr6 136514312 136515472 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi6g03966 Ovate 2.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03966 - - lja:Lj0g3v0324199.1 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03966 6 136514312 136515472 Vivi6g03966 6 136514312 136515472 ECH
Vivi6g03966 6 136514312 136515472 Vivi1g06418 1 144906761 144907742 PCT