Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03944 ATGGGTAATGGTGACTATGCTTCTTACTCTTCCGGTATGAACGTTGAGAGTGTTCACCGTGTGGCTATTCCGCCGCCGCAACCGTTTTTCGAGTCTCTGAAATATTCTATGAAGGAGACTTTATTCCCAGATGATCCATTGAGGAAGTTCAAGAATCAACCGGCTTTGAAGAAGTTTGTGCTTGCTCTTCAACACTTTCTTCCCATTTTGGAGTGGGGTCCGAAATATACTCTTGGCTTCTTTAAATCTGATCTTATTGCTGGGATCACCATTGCTAGTTTGGCTATTCCTCAAGGGATCAGTTATGCTAAACTTGCCAATCTTCCTCCCATTCTTGGACTTTATTCAAGCTTTATACCGCCGTTGATATACGCGATGATGGGTAGCTCGAGGGATTTGGCGGTTGGAACTGTGGCGGTTGGATCGCTTCTGATGGCGTCGATGTTGAGTCGTGAAGCTAGTCCAACCGAGAATCCGACGCTTTATCTCCACCTTGCTTTCACTGCTACATTCTTTGCTGGACTTCTACAATTATCACTTGGCCTCTTCAGGTTAGGGTTTATTGTGGATTTTCTATCACATGCAGCGATAGTAGGGTTCATGGGAGGAGCAGCTACAGTAGTTTGTCTACAGCAGCTAAAATCGATTTTAGGACTTGAAAAATTCACACATAAAGCTGATATTGTGTCAGTTATGAACTCTGTTTTCAGCCAAACTCACGAGTGGAGGTGGGAAAGTGCAGTGTTAGGATGTTGTTTCATTTTCTTCCTCCTTGTTACAAGATACTTCAGCAAACGACAACCAAGGTTCTTTTGGGTGTCAGCCATGGCACCACTGACGTCGGTGATATTAGGAAGTATATTGGTTTATCTAACTCACGCTGAGAAGCACGGGGTTGAAGTGATAGGAAACTTGAAGAAGGGGCTAAATCCACCTTCAGCATCAGATTTAGTGTTTGTGTCACCTTATTTGGGCACAGCCATCAAAACTGGACTCATTACTGGTATAATAGCTCTTGCGGAAGGAATCGCAGTAGGAAGAAGCTTTGCAATGTTCAAGAATTACCATATTGATGGCAATAAAGAAATGATAGCTATTGGTACCATGAATATTTTTGGTTCACTAACCTCTTGCTATCTCACAACAGGCCCGTTTTCGCGTTCGGCTGTGAATTACAATGCTGGTTGCAAAACTGCAGCATCAAACATTGTAATGTCAATAGCAGTGATGTTAACATTATTATTCCTAACTCCTTTGTTCCATTACACTCCTCTAGTGGTACTATCCGCCATAATCGTATCTGCAATGCTTGGACTCATAGATTATCAAGCCGCAATCCATTTGTGGAAAATAGATAAATTTGATTTTCTAGTATGTTTCAGTGCATACATTGGAGTTGTCTTTGGCAGTGTCGAAATTGGCTTAGTACTAGCAGTTGCAATATCTGTACTTAGAGTACTTTTATTTGTAGCAAGGCCTAGAACATTTGTGTTAGGAAACATTCCAAATTCATCGGCATACAGAAATGTAGAACATTATCCAAATGCACATCATGTACCTGGAATACTAATTCTTGAAATTGATGCGCCGATTTACTTTGCAAATGCAAGCTATTTAAGAGAGCGGATTACAAGGTGGATTGATGAAGAGGAAGAGAAAATCAAAGGTGCAGGAAGTACTAGTTTGCAGTATGTTATAGTGGATATGACAGCTGTTGCGAACATAGATACAAGTGGAATAAGCATGCTTGAAGAGTTCAAGAAGACAGTCGATAGAAAAGGACTACAACTTGTTTTGGTTAATCCCGGAAGCGAGGTGACGAAGAAGCTGAACAAATCAAAGTTCCTAGATGAAATAGGACATAAATGGGTTTATGTGACAGTTGAAGAGGCTGTTGGAGTATGCAGTAGCTTCATGCTTCATACACAAAAGGCTAACCCTAAAGATGAATCAGAAGGTTTGAATAGTGTGTGA 1974 0.4113 MGNGDYASYSSGMNVESVHRVAIPPPQPFFESLKYSMKETLFPDDPLRKFKNQPALKKFVLALQHFLPILEWGPKYTLGFFKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLSREASPTENPTLYLHLAFTATFFAGLLQLSLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEKFTHKADIVSVMNSVFSQTHEWRWESAVLGCCFIFFLLVTRYFSKRQPRFFWVSAMAPLTSVILGSILVYLTHAEKHGVEVIGNLKKGLNPPSASDLVFVSPYLGTAIKTGLITGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIFGSLTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFLVCFSAYIGVVFGSVEIGLVLAVAISVLRVLLFVARPRTFVLGNIPNSSAYRNVEHYPNAHHVPGILILEIDAPIYFANASYLRERITRWIDEEEEKIKGAGSTSLQYVIVDMTAVANIDTSGISMLEEFKKTVDRKGLQLVLVNPGSEVTKKLNKSKFLDEIGHKWVYVTVEEAVGVCSSFMLHTQKANPKDESEGLNSV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03944 657 Gene3D STAS domain 492 637 IPR036513 -
Vivi6g03944 657 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Vivi6g03944 657 FunFam Sulfate transporter 31 492 638 - -
Vivi6g03944 657 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Vivi6g03944 657 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Vivi6g03944 657 SUPERFAMILY SpoIIaa-like 513 635 IPR036513 -
Vivi6g03944 657 Pfam Sulfate permease family 81 461 IPR011547 GO:0016020
Vivi6g03944 657 PANTHER SULFATE TRANSPORTER 30 639 IPR001902 GO:0016020|GO:0055085
Vivi6g03944 657 NCBIfam sulfate permease 68 631 IPR001902 GO:0016020|GO:0055085
Vivi6g03944 657 Pfam STAS domain 513 631 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03944 Vivi-Chr6 136171279 136177482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03944 11 646 Inorganic Solute Cotransporters AT4G02700 67.033 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03944 K17471 - gmx:100791091 1143.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03944 6 136171279 136177482 Vivi6g03944 6 136171279 136177482 ECH
Vivi6g03944 6 136171279 136177482 Vivi1g06452 1 146095337 146102197 PCT