Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03929 ATGACAAGAGGAACGGGAGCAAAAGATCAAAAGCTTGAGAAACACTTTCAAAAACAGATGGGGTGCATGGCAGGTTTCCTACACATCTTCGATCGCCACCACTCATTTCCCGTTAAAAGACTCAATTCCACGAAACCAACGGAACCGGAAACAAACGGTTGTAACTCACCGGCTGAATCAACACCAGAAGCTGAAACAACTCAACCCGAAAAACCGACTGTTCAGATTCTTCCGGTTTTCGATTTCAAAGAAGGAACAAGATCTTCATGGAAATTCGCCAGAGAAGCACCGAGACTATCGTTAGATAGCAGGGCCGTAATGGATGCAAAAGGAACGATTCATCCTAAAGATGAAGAGAAACGACGACGCTCCACTAGCGTTGTTGCAAAGCTCATGGGTCTCGAAGACTCTGATCCTAACCCCAACCCTAACCCTAACCCGAAGCTGCAGAGATCAGCTTCGGAATCAACGGTTCACAGAGATCTATCTCATTCTCAACAGTATCGTTTCTTTGACACTACGAATTTCCAGTTAAAGCAATTCCAATTCGACAGTGGTTCATTGTTAAACGGCACAGACTCAGATCTAACTGAGAAAACAGAACCAGTCAGAGGAATAACAACCAAACAAAAGAAGTGTTTCTATGATTCCGCTGATTTTTTCCCTGGTCCGAAACAGAGTGTTTCTGTTTCCGTTCAAGGAGAGATTGAGAAACGGTTGAAGATGCGTGGGATTCATGAACCTTCTAAAGATCTGGAAACACTGAAACAAATCCTTGAAGCATTGCAGCTGAAAGGGCTCTTACATTCTAAGAAATTAGCAAATCATAAAAACTTCGTCATTGAGAATGTGAAGGAACACGAATCACCTATAGTTCTTATGAAACCTGGAAAATCATTTCACCGAACCGGTTGGACCGGAACCGGGAATGATTCTCCTCCACCCGTCTCCACTTTCCGGTCCAATCCAAAGACTCGAACTGATCATAATCAACCTAATGTTAAAAACAGAAACACCGCAAACTCCCCCACGCGCAGTCCTAACCGCGTGAGGAAAGTTACTAGCATGGAGAAAGAGCAAAGAGTGAATGACAGTGTTGATCGCCGAAGAGTTTCCCCCGTTCAATCCGCGAAGACTGAACCGAACCGGCAATCACCGATTCGGTCGCCAAGGATGAGAAAAGTTACAACTTACCAAAAGGAAGAGAAAACCATGGCGGAAGATGAATCGTCTACTGTTTCTGATGGTAGTTTCAGTAACTCTTCACGTACCGACACAGAGAGGCTAATTAAGGTGGTGGACCAATACAGAGAGGGGAAAGAGCTACTGCAGAGGTGTGATAAATTACTCAACAGTATAGCGGAAATAACTGAGTTACAACAACCGAGTCCCGTATCGGTTCTTGACTCGTCGTTTTACAAAGACGACTCGTCGTGTTCACCATCTCCAGTAATGAAAAGATGCATTGAATATAAAGATCTAGGAGCGGAGTCAGAAGAAGATGCTTGGAGTACAGCTTTGAGTTCAAACGAAACCAAGTCAGAGGATTCCGATTTCGTATATGTTTCAGAAGTACTTCGAGCTTCTAACTACTTACCAAAAGACAAAGACAATGACATGTTTCTGTTACTGGAACAGCAACAGTACCTCAAGGGAAACAAAAACACTTCCAATTCCAAAGTTTCCACTCTTCAAAGAAAGTTAATCTTCGACACCATTCATGAGATTCTCAACTGTAAACGCCGTTTGCCACCGTGGAAGTTGGAGAATCTACCGTCGTTACATCAAATCTGGTCGGAGTTTCGGAGGATCCGAGAGAGGGAAGAATCATCGGAGGATATGTTTGAGGTTATATGTGGTGTGTTGAAGAAGGACATGAAGGGTGAGAATGAATGGGGTGAATGCCAAGTGGAAATTGGAGACGTAGTGTTGGACATCGAACGGTTCATATTCAAAGATCTTATATGTGAAACCATTGGAGATCTAGCATTGTGTAGAGGAGTACCACGTAACAAAGTTTCGGTGCTTCGCAGGAAGTTAGAGTTTTATAATAATTAG 2058 0.4339 MTRGTGAKDQKLEKHFQKQMGCMAGFLHIFDRHHSFPVKRLNSTKPTEPETNGCNSPAESTPEAETTQPEKPTVQILPVFDFKEGTRSSWKFAREAPRLSLDSRAVMDAKGTIHPKDEEKRRRSTSVVAKLMGLEDSDPNPNPNPNPKLQRSASESTVHRDLSHSQQYRFFDTTNFQLKQFQFDSGSLLNGTDSDLTEKTEPVRGITTKQKKCFYDSADFFPGPKQSVSVSVQGEIEKRLKMRGIHEPSKDLETLKQILEALQLKGLLHSKKLANHKNFVIENVKEHESPIVLMKPGKSFHRTGWTGTGNDSPPPVSTFRSNPKTRTDHNQPNVKNRNTANSPTRSPNRVRKVTSMEKEQRVNDSVDRRRVSPVQSAKTEPNRQSPIRSPRMRKVTTYQKEEKTMAEDESSTVSDGSFSNSSRTDTERLIKVVDQYREGKELLQRCDKLLNSIAEITELQQPSPVSVLDSSFYKDDSSCSPSPVMKRCIEYKDLGAESEEDAWSTALSSNETKSEDSDFVYVSEVLRASNYLPKDKDNDMFLLLEQQQYLKGNKNTSNSKVSTLQRKLIFDTIHEILNCKRRLPPWKLENLPSLHQIWSEFRRIREREESSEDMFEVICGVLKKDMKGENEWGECQVEIGDVVLDIERFIFKDLICETIGDLALCRGVPRNKVSVLRRKLEFYNN 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03929 685 PANTHER LONGIFOLIA PROTEIN 72 680 IPR033334 GO:0051513
Vivi6g03929 685 MobiDBLite consensus disorder prediction 303 350 - -
Vivi6g03929 685 Pfam Domain of unknown function (DUF4378) 518 657 IPR025486 -
Vivi6g03929 685 MobiDBLite consensus disorder prediction 40 73 - -
Vivi6g03929 685 MobiDBLite consensus disorder prediction 394 409 - -
Vivi6g03929 685 MobiDBLite consensus disorder prediction 375 392 - -
Vivi6g03929 685 MobiDBLite consensus disorder prediction 132 160 - -
Vivi6g03929 685 MobiDBLite consensus disorder prediction 40 75 - -
Vivi6g03929 685 MobiDBLite consensus disorder prediction 410 424 - -
Vivi6g03929 685 MobiDBLite consensus disorder prediction 351 374 - -
Vivi6g03929 685 MobiDBLite consensus disorder prediction 293 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03929 Vivi-Chr6 135619395 135622701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03929 90 682 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 37.459 1.77e-96 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03929 - - vvo:131610134 1350.88