Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03913 ATGGAAATAACATTCAACTCAACAACGGCAAGAGTTCCTTCCTTGCCGCTAACTAAATCCGACGCTCGCGATCGGAATCCGTGCTCACTTTCCATCGTGCCGCGTAACGAATTCGTGCAGCTTTCTTCTTCTCCAACGCGCTTTCGCACTAACAAGAATTCTCTCTTCAAGGTTTTATCTGCTGAAAAGAATCATGTTCAAGTTGTAGAAGGAAGTGGTGTTGATGAGATCTATGATGCATTGGTTAATCGAATTCTGCCTCTGCCGTCAGTGTCGTTAAATCCTAATTATAAGTTTTTTGTTGGCCTGGCTGGTCCTCCTGGTGCTGGGAAAAGCACAATAGCACATGAAGTAGCTAGACGCATAAACAAGCTTTGGCCAGAGAAAGCTTCTTCCTTTGACTCCCAAGTTCAACCTCCTAATGTCGCTGCTGTGATTCCCATGGATGGTTTTCATCTTTATCGTTCTGAACTAGATGCAATGAAAAATCCCGAGGAAGCGCACGCCAGAAGGGGAGCTCCATGGACATTCAATCCTACGCGCCTTCTTACGTGTCTCAAGAATCTAAGAGTTCATGGATCAGTTTATGTACCATCATTTGATCATGGTGTTGGGGATCCAGTGGAAGATGATATCTTTGTCAACCTTCAACATAAAATCATTATTATTGAAGGTAACTATTTGCTTCTGGAAGATGGGGTATGGAAGGATATTTCATCTTTGTTTGATGAGAAATGGTTTATTGATATTGACATTGACAAAGCAATGCATCGAGTTTTAAAGAGGCATATCTCTACTGGCAAGCCTCGAGACATTGCTAAGCAGAGGGTAGAGAACAACGACAGACTCAATGCAGAACTTATAATGAAGTCTAAGAAAAATGCTGATATAATAATTAAGTCAGTTGATTTTTGA 915 0.4153 MEITFNSTTARVPSLPLTKSDARDRNPCSLSIVPRNEFVQLSSSPTRFRTNKNSLFKVLSAEKNHVQVVEGSGVDEIYDALVNRILPLPSVSLNPNYKFFVGLAGPPGAGKSTIAHEVARRINKLWPEKASSFDSQVQPPNVAAVIPMDGFHLYRSELDAMKNPEEAHARRGAPWTFNPTRLLTCLKNLRVHGSVYVPSFDHGVGDPVEDDIFVNLQHKIIIIEGNYLLLEDGVWKDISSLFDEKWFIDIDIDKAMHRVLKRHISTGKPRDIAKQRVENNDRLNAELIMKSKKNADIIIKSVDF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03913 304 Pfam Phosphoribulokinase / Uridine kinase family 101 302 IPR006083 GO:0005524|GO:0016301
Vivi6g03913 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 302 IPR027417 -
Vivi6g03913 304 Gene3D - 193 304 IPR027417 -
Vivi6g03913 304 Gene3D - 127 192 IPR027417 -
Vivi6g03913 304 PANTHER URIDINE KINASE 74 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03913 Vivi-Chr6 135326392 135330866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03913 174 299 PRT Gene Family AT3G27440 32.812 3.81e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03913 - - gmx:100798850 488.804