Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03890 ATGCTTCAACTTGAAGTGCTTCTTCTCTATCTCTTACCCGTTCTCTTGTTAATCCTTCCCATAATACTCTTCTTCTTATCAAAACCAAACAAGAAAGAAAAACCACTTTCTTCATCTTCAAGCAACAACAACATCACAATCCCAAAATCATACCCACTTATCGGCTCTTACTTATCTTACAAAAACAACTTACACCGCCGCATCCAATGGCTCTCCGACATCGTCCAAATCTCCCCCTCCGCCACTTTCCAACTCGACGGCGCCTTAGGTAAACGCCAAATCATCACCGGAAACCCATCCACAGTCCAACACATTCTCAAAAACCAATTTTCCAATTACCAAAAAGGCACATCCTTCACAAACACCCTCTCCGATTTCTTAGGAACCGGAATCTTCAACACCGACGGCCAAAACTGGAAGTTCCAAAGACAAGTCGCAAGTCACGAATTCAACACCAAATCAATCCGTAACTTCGTAGAACACATAGTCGACACTGAACTCACCAACCGATTGATCCCGATCCTCAACTCATCGTCCCAAACAAACCAAATCCTCGACTTCCAAGACATTCTCCAACGTTTCACTTTCGACAACATCTGCAAAATCGCGTTTGGTTTTGATCCCGAGTATCTAACTCCGTCAGCGTCAACTAACCAAACAAAATTCGCTCTAGCATATGAAGATGCAATGGAAATAAGCTGCAAACGTTTTCGTTTACCGTTACCAATCATATGGAAAATCAAAAAATACTTCAACATAGGTTCCGAGAAGCGTCTCAAGGAAGCAGTTACAGAAGTACGAGAATTCGCGAAAAATATAGTACGAGAAAAAAAACGTGAGTTAGAAGAAACATCATTGCTTCAAACAGAAGACATGTTATCGCGTTTTTTAAGTTCAGGCCATTCAGAAGAAGAGTTTGTTACAGATATGGTGATAAGTTTTATATTAGCAGGGAAAGATACAACTTCAGCTGCATTAACATGGTTTTTCTGGCTATTATGGAAGAATCCACGTGTTGAGGAAGAGATAGTGAAGGAAGTGAGTAAAAAATCCGAGTCGTTGGTTTATGATGAAGTGAAGGAAATGGTTTATACGCATGCGGCGTTGAGTGAGAGTATGAGATTGTATCCGCCTGTGCCGACGGATAGTAAGGAAGCTGTGAAAGACGATGTTTTACCGGATGGAAGGTTTGTGAAGAAAGGGATGATAGTGACTTATCATGTGTATGCGATGGGGAGGATGAAGAGTTTGTGGGGGGATGATTGGGCTGAGTTTAGGCCGGAGAGGTGGTTGGAGAGAGATGAGGTGAATGGGAAATGGATTTTTGTGGGGAGAGATTTGTATTCTTATCCGGTTTTTCAGGCTGGGCCTAGGGTTTGTTTGGGAAAAGAAATGGCTTTTATGCAAATGAAGAGGATTGTTGCTGGGATTGTTGGGAAGTTTAAGGTGGTGCCTGTGGGGAAAATGGATGAACATCCTGGTTTCATTTCTTTTTTGACTTCGCAGATGGAAGGTGGGTTTCATGTCACCATTCAGAAGAAGGTTCCTTGA 1551 0.4223 MLQLEVLLLYLLPVLLLILPIILFFLSKPNKKEKPLSSSSSNNNITIPKSYPLIGSYLSYKNNLHRRIQWLSDIVQISPSATFQLDGALGKRQIITGNPSTVQHILKNQFSNYQKGTSFTNTLSDFLGTGIFNTDGQNWKFQRQVASHEFNTKSIRNFVEHIVDTELTNRLIPILNSSSQTNQILDFQDILQRFTFDNICKIAFGFDPEYLTPSASTNQTKFALAYEDAMEISCKRFRLPLPIIWKIKKYFNIGSEKRLKEAVTEVREFAKNIVREKKRELEETSLLQTEDMLSRFLSSGHSEEEFVTDMVISFILAGKDTTSAALTWFFWLLWKNPRVEEEIVKEVSKKSESLVYDEVKEMVYTHAALSESMRLYPPVPTDSKEAVKDDVLPDGRFVKKGMIVTYHVYAMGRMKSLWGDDWAEFRPERWLERDEVNGKWIFVGRDLYSYPVFQAGPRVCLGKEMAFMQMKRIVAGIVGKFKVVPVGKMDEHPGFISFLTSQMEGGFHVTIQKKVP 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03890 516 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g03890 516 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g03890 516 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g03890 516 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g03890 516 PANTHER CYTOCHROME P450 34 509 - -
Vivi6g03890 516 CDD CYP86A 82 507 - -
Vivi6g03890 516 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g03890 516 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g03890 516 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g03890 516 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g03890 516 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g03890 516 SUPERFAMILY Cytochrome P450 48 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g03890 516 Pfam Cytochrome P450 48 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g03890 516 Gene3D Cytochrome P450 34 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03890 Vivi-Chr6 134898834 134901694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03890 14 514 Cytochrome P450 AT5G63450 47.233 2.51e-159 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03890 K20769 K13407 ag:AAD10204 847.81