Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03879 ATGGGTAGCAATTTGCATCAACTACTCAGAAGTCTTTGTTTCAATACTCATTGGAATTATGCTATATTTTGGAAGCTCAAGCATTGTGCTCCAAATCCAATGATCTTAACATTGGAGGATGCTTACTGTGACAATTCGGATTATTTTGACGCTTCAGAAAATAAGACCTTGGAACAGATTAAGGGTGGGAAATTTTCACATGAAGCTTTGGGGTTAGCTGTGGCAAAAATGTCGTATAATGTTTACTCATTAGGGGAAGGTGTTGTTGGACAGGTAGCTGTTACTGGAAAACATCGGTGGATCTGTGCAGATGATCAAGTTACAAGTTCTGACTTGTCTTTTGAGTTTACTGATTTGTGGCAAACACAGTTTTCTGCTGGAATTAGGACAATTGTTGTTGTGTCTGTAGTCCCACTCGGCGTTGTTCAGCTTGGATCTCTAATAAAAGTGAATGAAGATATGGGAGTTATTAATCATATAAGAAACCTTTTTTTGTTTACTCAAGATTACTCAATAGACCACATTCCTAGTCAAATACAACATAGTTTGAAGAGCTCTTCATCTCATGATATTTTGATGGAAAAATCATCTTCAGATATTATGCCTGCATGCATGACGAATGAAACAGTGGATGTTTTGATGCCCCTTCAATGTTCTGGGAGGAACAGTGCAACTAATTCTGCTTATTGGGAAATGGGTGATGATGTGATCAAGCACGAAATACCCGAGCTCAATAGTGATGTGAGTCCCATTTTGCTTCAGTCGACGTTTGATATGATTAACGTGAAGCATCAGGAATTTGGAGAGATAAGGCCTCTAAGTGCGAGGGAGTGTGCAGGGGGCAGTGATGGCCACAAAAATATGAGATTAGAATCGGAACAAAATTTATCATCATTTTTGAACAATTCTCTTATAAATAATGATGGCGTCAGCGATTTGATACACCATTCAGAAAAGTCCAGAGTTGATTCTGCATGCTTTCCTACAGATTTTCTAGAAGCATATGTTTCAGAAAGTGACAAATCTCATAAACACTGCAAAAAGTCAGAGTTTTGGACTGTGCCTTGTGGCAAGGATACCTCCTATACACAGTTGAGTTTTCCGGCTGGCTGTGAACTACACGAAGCACTTGGACCAGCATCTTTGAAAGGGAGCAAATATTTGGATTCGCTGGCACAGGTTAATCAAGATGTGAAAATTATGGATATGCCAGACACAGTTAACACTAGTCAATCAACTCCAGAGCATCTTTTGGAAGCAATGGTGGCCAATATTTGTCACAGTAGTAATAATGATGTTAATAGTGAATCATCATTTTATAGATCAAAGCAATCTGCAATAAGTTCTGGCAAAAAACCTGAAGTTTCTATTCAAAATGTGACTGTTAATCCAGAAAGCTATTCAATAGATCATCCTTCTCTTTTCAGAGAGGAAAAACACCATTGTTTGAGCTCATCGTCAGGGGTATGTGGTGTTATGTCATCTCAAGGCATTTCATCTCTATGTCCTAGTGCTTGTAGTGAACAACTCGAAAGGTCATCTGAACCATCTAAGAACATCAAAAAGAGAGCTAGACCTGGAGAAAGTTGCAGACCTCGGCCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTGAGAGAGTTGGTTCCAAATGGTGCAAAGTGCAGTATTGATTCACTACTGGAGCGCTCGATAAAGCACATGCTCTTTCTGCAAAGCATAACTAAGCATGCTGACAAGCTAACAAAATTCGCTGATTCTAAATCAAAGTTGCATCATGTGGAAGCAGACATTCTTGGATCCTCTAGTAGTGAGCAGGGTTCAAGTTGGGCAATGGAGGTAGGGGGTCATCTAAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAACGGACAGATGCTTGTTGAGATGCTATGTGAAGAATGGAGCCATTTTCTTGAAATAGCGGAAGCCATAAGAAGCTTAGGCCTTACAATTGTGAAGGGTGCAACAAAAACTCGCGATGACAAGATGTTAATATGCTTTATTGTTGAGGTTGAAAACAACAAAAATGTACACCGATTGGACATCTTGTGGCCGCTTGTTCAGATACTGCAATCCAAGAGCACTGCAGCAACAGTAACTGGTTGA 2139 0.3974 MGSNLHQLLRSLCFNTHWNYAIFWKLKHCAPNPMILTLEDAYCDNSDYFDASENKTLEQIKGGKFSHEALGLAVAKMSYNVYSLGEGVVGQVAVTGKHRWICADDQVTSSDLSFEFTDLWQTQFSAGIRTIVVVSVVPLGVVQLGSLIKVNEDMGVINHIRNLFLFTQDYSIDHIPSQIQHSLKSSSSHDILMEKSSSDIMPACMTNETVDVLMPLQCSGRNSATNSAYWEMGDDVIKHEIPELNSDVSPILLQSTFDMINVKHQEFGEIRPLSARECAGGSDGHKNMRLESEQNLSSFLNNSLINNDGVSDLIHHSEKSRVDSACFPTDFLEAYVSESDKSHKHCKKSEFWTVPCGKDTSYTQLSFPAGCELHEALGPASLKGSKYLDSLAQVNQDVKIMDMPDTVNTSQSTPEHLLEAMVANICHSSNNDVNSESSFYRSKQSAISSGKKPEVSIQNVTVNPESYSIDHPSLFREEKHHCLSSSSGVCGVMSSQGISSLCPSACSEQLERSSEPSKNIKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERSIKHMLFLQSITKHADKLTKFADSKSKLHHVEADILGSSSSEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEEWSHFLEIAEAIRSLGLTIVKGATKTRDDKMLICFIVEVENNKNVHRLDILWPLVQILQSKSTAATVTG 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03879 712 MobiDBLite consensus disorder prediction 514 536 - -
Vivi6g03879 712 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 524 573 IPR011598 GO:0046983
Vivi6g03879 712 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 164 IPR025610 -
Vivi6g03879 712 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 707 IPR043561 GO:0003700|GO:0006355
Vivi6g03879 712 MobiDBLite consensus disorder prediction 512 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03879 Vivi-Chr6 134696337 134701883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03879 1 705 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.793 1.77e-145 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03879 - - mtr:25499239 985.711