Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03840 ATGGGAAGAGCTCCATGTTGTGAGAAAATGGGGTTGAAGAAAGGACCATGGACTCAAGAAGAAGATAGAATCCTCATCAATCATATAAACACTTTTGGTCATTCCAACTGGCGTGCTCTTCCCAAACAAGCTGGTTTGTTAAGATGTGGAAAGAGTTGCAGATTGAGATGGGCAAATTATTTGAAACCGGATATCAAACGCGGTAACTTTACCAAAGAAGAAGAAGATGCAATAATCAATTTACATGAAATGTTGGGAAACAGATGGTCAGCTATAGCAGCAAGGCTACCTGGTCGAACAGACAACGAGATCAAAAACGTATGGCACACACATTTGAAGAAGAGGCTGCCACAAAACCAACAAGCCAACAATGAAACCTTAAAACAAAGTAAAAAAGAAAGCAAGTTGGAATTAGATGTCGATGCGAAACAAGAACAATGTTCTAGTGACATTTCATCCCATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGTAATAATAGTATTAGTAGTAGCGTTGTTACTACTAATAATCAAGATAATAGTAACAATAATGATGATGTTGATTCGGTGGAAAATAAGTTTGCAATGGATGAGGATTTCTGGTCTGAAGTTTTGTCGTCTGATAAATCTAGCAATATGGACATTGGTGGTGATAATTATGAATTTCAAGTTGGTGATGAAGGTGTGTTTAGTTCTAGTTCATTGAGTTTGTGTCAAGATATGGATTTTTGGCATGATGTTTATGCGAGAGCTGAGGAAATAACTGAGCTATTAGAGTTATGA 801 0.3496 MGRAPCCEKMGLKKGPWTQEEDRILINHINTFGHSNWRALPKQAGLLRCGKSCRLRWANYLKPDIKRGNFTKEEEDAIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLPQNQQANNETLKQSKKESKLELDVDAKQEQCSSDISSHNNNNNNNNNNNNNNNSNNSISSSVVTTNNQDNSNNNDDVDSVENKFAMDEDFWSEVLSSDKSSNMDIGGDNYEFQVGDEGVFSSSSLSLCQDMDFWHDVYARAEEITELLEL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03840 266 CDD SANT 69 112 IPR001005 -
Vivi6g03840 266 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 218 - -
Vivi6g03840 266 MobiDBLite consensus disorder prediction 145 195 - -
Vivi6g03840 266 MobiDBLite consensus disorder prediction 113 195 - -
Vivi6g03840 266 CDD SANT 16 61 IPR001005 -
Vivi6g03840 266 FunFam Transcription factor MYB15 68 142 - -
Vivi6g03840 266 Gene3D - 11 67 - -
Vivi6g03840 266 MobiDBLite consensus disorder prediction 113 127 - -
Vivi6g03840 266 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Vivi6g03840 266 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Vivi6g03840 266 SMART sant 66 114 IPR001005 -
Vivi6g03840 266 SMART sant 13 63 IPR001005 -
Vivi6g03840 266 Gene3D - 69 145 - -
Vivi6g03840 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Vivi6g03840 266 MobiDBLite consensus disorder prediction 128 144 - -
Vivi6g03840 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Vivi6g03840 266 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Vivi6g03840 266 FunFam MYB-related transcription factor 13 66 - -
Vivi6g03840 266 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Vivi6g03840 266 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03840 Vivi-Chr6 134106218 134108002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03840 1 266 MYB Transcription Factor Family AT2G31180 48.736 1.79e-84 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi6g03840 Myb_DNA-binding 8.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03840 K09422 - gmx:100775603 310.457