Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03797 ATGGCAGGAAGAACCCGAGGAGACGCATGGAAGAACAGTCCAATTACACGGTTTTCATGGAGTGGCAAAACCATTGCACTGGATCGAAATTCGATAACACTGCCTCCATGGGTGGCAGTAGGGGATCCATTGAGTGGCAAAACCACCCTACTGGATCGTATGACATTGAAATTGAATAAGTTGGGATACAGATACATGATCGATTATGATATCGCAATCTTGGTTCTTGATATTACTATTTACTTACAACAACAAACAATTCGATTGATCAATCTTTTACAAACATGGAACTCAAGATTCATTGTCGCCTTGAATCGCCTCGACAGGTTTCATGGATGGAAAACATGCAGTAATTCTCAATTTCTTTCATCATTTAACCTCCAGAGTAAGGTCGTTAAACATAGGTTTTATGGAAGGCTCAAAGAGATTAACTCTCAGTTCAAAGAACTTGGGATAAGTACATGTTTGTATTGTTGGAACAAAGAAATAGGAAAAACTGTCAGCCTTGTGCCTACAAGTGCAAGAAGTGGTGAAGGAATCCTTGATATGATAGAACAATTGATTTTATTGAGCCAGAAAACTATGGTTGAGAAATTTCATGCCAGGGAAAAATTTAAGTGCACTATTTTGGATGCAAGCAGAAGCGCTATCAATGTTGTTTTACTTAATGGTGTTCTTCATGAAGGAGATCAAATAATTGCCTGTGGAAAGCAGGGGCCAATTGTTACCACAATTCAAGTTTTATTGACACTCCCGCCAATAAAAAAACTTGGTGATAAGGCTCATCATATTCGTCATGAAAAAATCAAAAGTGTTAATTCCGTCAAGATAATTGCCAAGGGGCTTGAACATGCTGTTGTTGGCACTTATTTAAATGTGGTGAAGCCTGCCCGAGACTAA 900 0.3878 MAGRTRGDAWKNSPITRFSWSGKTIALDRNSITLPPWVAVGDPLSGKTTLLDRMTLKLNKLGYRYMIDYDIAILVLDITIYLQQQTIRLINLLQTWNSRFIVALNRLDRFHGWKTCSNSQFLSSFNLQSKVVKHRFYGRLKEINSQFKELGISTCLYCWNKEIGKTVSLVPTSARSGEGILDMIEQLILLSQKTMVEKFHAREKFKCTILDASRSAINVVLLNGVLHEGDQIIACGKQGPIVTTIQVLLTLPPIKKLGDKAHHIRHEKIKSVNSVKIIAKGLEHAVVGTYLNVVKPARD 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03797 299 Pfam Elongation factor Tu GTP binding domain 68 190 IPR000795 GO:0003924|GO:0005525
Vivi6g03797 299 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 70 297 IPR015760 -
Vivi6g03797 299 Gene3D - 58 201 IPR027417 -
Vivi6g03797 299 Gene3D Translation factors 204 299 - -
Vivi6g03797 299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 250 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03797 Vivi-Chr6 133371585 133373129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03797 70 299 Eukaryotic Initiation Factors Gene Family AT1G76810 49.362 1.77e-67 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03797 K03243 - vvo:131614718 598.586