Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03775 ATGTTCATTTTTCATTTCCTATACTCATCATTAGTCTCATCAAAATCTGGAGAAAGAGTTTCTATATCCAGACGTGAAAAAGTTGCGATATCGATATCTTCTAAAAAGAAAAATCGAATGACATCGCTTGAAAACTTTACATCCAAGTTAACAGCACTTGTTGTAGATGACACTGAAATCATTCGAAAAATTCATCAAAAGATGTTGAATAGTTTAGGAGTGAAAAGTGAAGGTGCGAAAAATGGAAAAGAAGCACTTGAAATTCATAGCTATGGCAAAAAATTTGACCTAATTCTCATGGATAAAGATATGCCTATCATGAATGGTCTTGAGGCAACAAAGGCACTTCGTGCAATGGGAATTTGTAGCACTATTGTTGGAGTGTCATCACATTCAATGGAAGAGGAAATAGTCAAGTTTATGGAAGCAGGACTAGATGAGTATCAAGAGAAGCCTTTGAACAAAGTGAAACTCAATTCTATTCTTGACAAGATCAAACACAATCTCATGTCCAATTGA 519 0.3468 MFIFHFLYSSLVSSKSGERVSISRREKVAISISSKKKNRMTSLENFTSKLTALVVDDTEIIRKIHQKMLNSLGVKSEGAKNGKEALEIHSYGKKFDLILMDKDMPIMNGLEATKALRAMGICSTIVGVSSHSMEEEIVKFMEAGLDEYQEKPLNKVKLNSILDKIKHNLMSN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03775 172 ProSiteProfiles Response regulatory domain profile. 51 166 IPR001789 GO:0000160
Vivi6g03775 172 Gene3D - 29 171 - -
Vivi6g03775 172 CDD REC_hyHK_CKI1_RcsC-like 53 162 - -
Vivi6g03775 172 SUPERFAMILY CheY-like 49 165 IPR011006 -
Vivi6g03775 172 PANTHER TWO-COMPONENT RESPONSE REGULATOR 40 168 - -
Vivi6g03775 172 Pfam Response regulator receiver domain 53 161 IPR001789 GO:0000160
Vivi6g03775 172 SMART REC_2 50 162 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03775 Vivi-Chr6 132907025 132908192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03775 50 162 Response Regulator Gene Family AT3G04280 46.087 5.31e-27 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi6g03775 Response_reg 7.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03775 - - vvo:131612427 331.643