Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03768 ATGAATACTATGATGAATAATAGAACGGTTCACAATGATGAGAAGCCTTTTCCTGGATGCTTGGGAAGAATGGTTAACCTTTTTGATTTGACTACTGCTACTGGAAATGGAAACAAGCTTCTCACCGACAAGCCACACCGTGATCATGCATCTCTTTCAAGAAGTCAATCAGATGTTTCGAGGATTGCAAGTCCTTCATTTGCTGATCAGATAGAAGATAGGCCGATTGTTTCTAACTTAATGAGAGCATCTTCAAATAAAAAAATAAATGGAACACCCATCAAGATGCTCATGGACCAAGAAATGTCCAAAGAAGTTGTTTCCAAGCATACTCCACCAAATGTTGTCGCAAAGTTAATGGGCCTTGAAGCCCTTCCACAGGGAAAACGTAATTTACCTGTGGAGAGAAGCCCTGGAGGAGATTGTTCTCAGCACATGTGTGGTCATTCTGGCACTTCATTCAATCATCGGCAGTTGGATGATAGGTTTATGGACAAGGAAATGCTTCATGATATTCGTCCGAGCAGAGAACAGGTTGCTTACAAAGATATTTATGAAATATGGCTGCAATCACAGAGAACAAGTAATGTTAACGACAAGACACCAGAGAGAGGGAAGTGGGCTGAAGATGTTAATGAGAAGAAAATGGCTTTTATTCGTCAAAAATTCATGGAAGCAAAGCGACTGTCTACAGATGAGAGATTACGCCAATCAAAGGAGTTTGATGAAGCCTTGGAAGTTTTAAGCTCAAATAACGATCTGTTAATCAGGCTATTGGATTCTCAAAATCTATATGAACGGCAGTCTACTCCACTGGCTGAGACAAAGCGCATTACTGTTCTTAAACCTTCAAAGTTGGTTGACAATGAAAAGTTCAGTAGAAAGGGAAACAATAACGACAAACATATTAAGAAACCATTAAATAATGATGCTGCATGGGAGAGAAATAGTCCTGGATACTCTCCTGCCAGTCAGAAAGCTGATGAATTTCCTGTCCAACCTACTCGAATTGTGGTATTGAAGCCTAGTTCTGTGAGAGCACATGATGTTAAGGCCTTGGTTTCTCCAATGTCATTATCACCTCAAAATCTGCAAAGTGGAAACTTCTATCACGGCCCTGAAGATGATGATGATCTACTTGAATCAAGAAAAGTGGCAGAAGACATTACACAGCAAATGCATGAAGACCTCAGGAGCTATCAGAGGGATGAAACCGTGTATTCTCCAGTATTTTCCACTGGATATATTGGTGATGACAGTTCATTCTACAAATCAGATCATGAGTGTACTGCAGGGAATTTTAGTGATTTAGAAGTCATGTCGCCATCTCCCAGGCATTCTTGGGATTTCGTCAATCGCTGTGGAAGTCCTTATTCTTCATCATCCTTCAGTCGTGCTTCGGGCTCTCCTGAATCATCAGTAGGCAGAGAGGCTAAGAAACGACTCTCTGAAAGATGGGCCATGATGGCATCTAAGAAGGATCTTCAAGAGCAAAGACATATGCGGAGAAGCTCTACCTTGGGTGAGATGCTTGCTCTTTCAGATATAAAGAAATCTCTAATATCTGAGGTTGAAGGTATTAATGAAGAACCAGAACCGAGGGAATCTGTTTCTTGCAGTAAAAATTCGAATGATGAAGAAATATCCGCGGATGGGTCTACTAAAAGCCTCCCCAGGTCAAAGTCTGTCCCTGTATCTTCCAATGTCTATGAAAATGGGCTCTACATTGAAGCTTGTAATAACGATGCTGGTAAAGCACACGGCTCCAAGGAGCTGACGAAGTCAAAGAGTATGAAGTCAACATTTAAAGGGAAAGTTGCGAGTTTCTTATTCTCAAGGAATAAGAAATCAATCAGGGAGAAATCTTGTCTTTCTCATTCTACAGATGAATCTCAGTCAACTATTGCAGAAACATCAGTATCTACAATAAACTCACCTGAAGTCTTTAGGAATGATGTGTCTCAAAGCTTCAACGGTGGGTCCTTTGAAGAGTGTTCCCTTCCAGCTCTATGTGAATCATCGAGCAAAACTTTATCCTATCCTGTCTCTAGCAGACGAGGCGTAATATCTATGGAGCCTGAATTTACCACGTCAAAGCCCACAGTGACAGGGATTTCAACTGAAAACCAGGACCAACCAAGTCCAATCTCAGTTTTAGAGCCTCCCTTTGAAGATGAAAATGCAGCTCACGAGTCCTTGGACTGTATGAAGGGTGGTCTGCTTGGATCACGGGTGTCTCTGAAGTCTAATTTAATTGACAAATCACCTCCTATAGAATCAATAGCTCGAACCCTCTCATGGGATGGTTCTTGTGCGGAGGTGGCAAGTTCGTACCCATTAAAGCCTACATCGGTTTCCTTAGACACCAAAGTAGAGGATCAAGACTTGCTCGTCTTTGTTCAGAAATTACTATCAGCTTCTGGACTTGATGATCAAGTGCAGTCTGACTCGTTTTACTCTAGATGGCATTCCCTTGAAAGTCCATTGGAGCCATCATTGAGGGACAAATATGCCAATCTCTACGACAAGGAGGCTCAGCCTCTTCATGAAGCAAAGCGAAGGCAGAGGAGATCTAATCAGAAGCTTGTATTTGATTGTGTCAATGTTGCACTAATAGAAATTACTGGCTATGGATCAGAAAGTTCCTTATTTGGTAGGTTGTGGAGTGGGGACCATAGAAGGCTCCAATTATCAGAGGGTGCACCTCCCCTTTTGGTAGACCTTATTGTAGCCCATATGAAGGAGTTGACATCTAGTGGCATAAGGTCTGTTTGGGGGGATTGTGGGGACAGTAACAGCCTGGTAGTGGAAACTGTAGTGAGAAAAGAGGTCGTGGGTAAAGGGTGGGTTGAGCTAATGGGATTAGAGATGGATATTTTGGTAAAGGAAGTAGAAGGGAAGTTGCTTGAAGAACTTGTGGAGGATGCAGTGGTTGATTTGACAGACAGGGTGGTGTGA 2958 0.4219 MNTMMNNRTVHNDEKPFPGCLGRMVNLFDLTTATGNGNKLLTDKPHRDHASLSRSQSDVSRIASPSFADQIEDRPIVSNLMRASSNKKINGTPIKMLMDQEMSKEVVSKHTPPNVVAKLMGLEALPQGKRNLPVERSPGGDCSQHMCGHSGTSFNHRQLDDRFMDKEMLHDIRPSREQVAYKDIYEIWLQSQRTSNVNDKTPERGKWAEDVNEKKMAFIRQKFMEAKRLSTDERLRQSKEFDEALEVLSSNNDLLIRLLDSQNLYERQSTPLAETKRITVLKPSKLVDNEKFSRKGNNNDKHIKKPLNNDAAWERNSPGYSPASQKADEFPVQPTRIVVLKPSSVRAHDVKALVSPMSLSPQNLQSGNFYHGPEDDDDLLESRKVAEDITQQMHEDLRSYQRDETVYSPVFSTGYIGDDSSFYKSDHECTAGNFSDLEVMSPSPRHSWDFVNRCGSPYSSSSFSRASGSPESSVGREAKKRLSERWAMMASKKDLQEQRHMRRSSTLGEMLALSDIKKSLISEVEGINEEPEPRESVSCSKNSNDEEISADGSTKSLPRSKSVPVSSNVYENGLYIEACNNDAGKAHGSKELTKSKSMKSTFKGKVASFLFSRNKKSIREKSCLSHSTDESQSTIAETSVSTINSPEVFRNDVSQSFNGGSFEECSLPALCESSSKTLSYPVSSRRGVISMEPEFTTSKPTVTGISTENQDQPSPISVLEPPFEDENAAHESLDCMKGGLLGSRVSLKSNLIDKSPPIESIARTLSWDGSCAEVASSYPLKPTSVSLDTKVEDQDLLVFVQKLLSASGLDDQVQSDSFYSRWHSLESPLEPSLRDKYANLYDKEAQPLHEAKRRQRRSNQKLVFDCVNVALIEITGYGSESSLFGRLWSGDHRRLQLSEGAPPLLVDLIVAHMKELTSSGIRSVWGDCGDSNSLVVETVVRKEVVGKGWVELMGLEMDILVKEVEGKLLEELVEDAVVDLTDRVV 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03768 985 MobiDBLite consensus disorder prediction 459 480 - -
Vivi6g03768 985 Pfam DUF761-associated sequence motif 112 129 IPR032795 -
Vivi6g03768 985 Pfam Protein of unknown function (DUF3741) 220 263 IPR022212 -
Vivi6g03768 985 MobiDBLite consensus disorder prediction 290 309 - -
Vivi6g03768 985 MobiDBLite consensus disorder prediction 524 541 - -
Vivi6g03768 985 MobiDBLite consensus disorder prediction 542 564 - -
Vivi6g03768 985 Pfam Domain of unknown function (DUF4378) 798 975 IPR025486 -
Vivi6g03768 985 MobiDBLite consensus disorder prediction 39 61 - -
Vivi6g03768 985 MobiDBLite consensus disorder prediction 290 328 - -
Vivi6g03768 985 MobiDBLite consensus disorder prediction 524 564 - -
Vivi6g03768 985 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 983 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03768 Vivi-Chr6 132780880 132786010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03768 5 981 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 43.644 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03768 - - psat:127125933 1817.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03768 6 132780880 132786010 Vivi6g03768 6 132780880 132786010 ECH
Vivi6g03768 6 132780880 132786010 Vivi1g06729 1 157578522 157582717 PCT