Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03756 ATGGTCAGTATAAGTGATCACAAAGGTAAACAAATAATGTTATCTGATAGTGAAGATAGTGAAGATGATGATCTTTCACCAAGCCCCCATCGAAAAATAATAAGAGCACTTGTTGTGCACCATGATGACCACATTGGAAAGGTTAATGAAGTTATGTTGAATAGACTTGGTGTGGAAACTCGTTCAGTGAAAACTAGCCAAGAAGCTATAAAATTAATTTGTGTTGAGGAAGTCTATGACTTAATTCTCCTTGGTAGGTATTTACCTGTCATTGATGGGGTTCAGATGACGAAGATGCTGCGAGACATGGAGTACCCTACAACGATTGTTGGCGTGACGCGTTTCCTTACAGAAGTACAACGGGAAGAATTTTTCAGTGCAGGGCTAGACGGTTGCATTGATAACGAGGCACCCTTGACCGATAAAACGCTTGCATGCATTGTTGAAAGTATTCCCCGTCGCCAAACCTGGAAGAAAAGAAATTTTTATAGTACAATTTACAAATCTTTTCGGCCTCCTAGTGTTCCTTTTGGTCCTGGTTCAACCTCTACTTCTAGAGACGTGTCTAAAAAAGATTAA 579 0.399 MVSISDHKGKQIMLSDSEDSEDDDLSPSPHRKIIRALVVHHDDHIGKVNEVMLNRLGVETRSVKTSQEAIKLICVEEVYDLILLGRYLPVIDGVQMTKMLRDMEYPTTIVGVTRFLTEVQREEFFSAGLDGCIDNEAPLTDKTLACIVESIPRRQTWKKRNFYSTIYKSFRPPSVPFGPGSTSTSRDVSKKD 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03756 192 Pfam Response regulator receiver domain 37 134 IPR001789 GO:0000160
Vivi6g03756 192 SMART REC_2 34 147 IPR001789 GO:0000160
Vivi6g03756 192 SUPERFAMILY CheY-like 35 133 IPR011006 -
Vivi6g03756 192 Gene3D - 34 168 - -
Vivi6g03756 192 PANTHER TWO-COMPONENT RESPONSE REGULATOR 27 156 - -
Vivi6g03756 192 MobiDBLite consensus disorder prediction 1 27 - -
Vivi6g03756 192 ProSiteProfiles Response regulatory domain profile. 35 150 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03756 Vivi-Chr6 132577624 132578290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03756 31 140 Response Regulator Gene Family AT3G04280 36.607 1.29e-13 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi6g03756 Response_reg 1e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03756 - K02483 psat:127125942 196.052