Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03741 ATGAAAGATCAAGAGAAAGGGAAAGGGCTCATGGAACCTCAAAACTCAGCTACCGAATTAACAGCGCTTATTGTAGATGATGATAAGCTTGTTAGAATGATTCATCAAGGTCTATTGAAAAGAGCTGGTGTGAAAAATGAAGCAGTAAAGAATGGTAAAGAAGCCATAGATATTCATTGTAGTGGTCAAAGTTATGACATTATTTTCATGGACAAAGATATGCCTATCATGAATGGGATTGAGGCAACCAAGAAACTACGATCAATGGGTATTGAAAGCATGATTGTTGGTGCGTCATCATGCAATAGAGATGCAGAAAAACAAGAATTTATTGAGGCAGGGCTAAATGACTATCAAGGGAAACCATTGACCCTTGAGGCACTTAAGTCGATTCTTGATGTGGTAAAAGCTAGCAAGTAG 420 0.381 MKDQEKGKGLMEPQNSATELTALIVDDDKLVRMIHQGLLKRAGVKNEAVKNGKEAIDIHCSGQSYDIIFMDKDMPIMNGIEATKKLRSMGIESMIVGASSCNRDAEKQEFIEAGLNDYQGKPLTLEALKSILDVVKASK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03741 139 CDD REC_hyHK_CKI1_RcsC-like 23 132 - -
Vivi6g03741 139 SMART REC_2 20 132 IPR001789 GO:0000160
Vivi6g03741 139 Gene3D - 2 138 - -
Vivi6g03741 139 SUPERFAMILY CheY-like 19 133 IPR011006 -
Vivi6g03741 139 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 136 - -
Vivi6g03741 139 Pfam Response regulator receiver domain 23 132 IPR001789 GO:0000160
Vivi6g03741 139 ProSiteProfiles Response regulatory domain profile. 21 136 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03741 Vivi-Chr6 132470599 132471638 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03741 20 124 Response Regulator Gene Family AT3G04280 46.729 1.48e-27 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi6g03741 Response_reg 1.7e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03741 - - cam:101506170 182.185