Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03730 ATGGGTTTTGATGAAACTTTGGTCACATGGCTTTCTTCTTCAGGATCATGGAGGAAAAATACCCTTTTGACTGAGATCCTTGGATTGCCAGTTTTGGAACTTGTGGCAATATGTACTAATTTGGTTGTTCTTGTTTTGTTTCTTTTGCGGCAGATTTTTTTATGTTTTGGTGGGAGAGTTTGGTTTTATAAGGATAATAATAGTATTAATAATAGTACTGTTGTTGTTGGCAATGGTGGTTTAATTCGTGGTAGTGTTGTTGGAGAAACTTTTGAGGTTAGGATTGGGACATGGTTTAAGTTGTCTGTGTTGTCTTGTTTTTATGTTCTGTTGGTGCAAGTTTTTGTTTTGGGGTTTGATGCTGTTTCTTTGATTAAGGATGAGTTTGTGGTTGTGGATTTGTCTCTTCTTTCGGCGCCGTTTGTTCAGGGCTTGGTTTGGATTGTGTTGAGCTTTAGTGTTTTGCATTGCAAATACAGGGTTTCTCAGAAGTTTCCGATTTTGCTGAGGGTTTCTTGGTTTGTATTGTTTGTTGTTTGTTTGTGTGGTTTATATGTTGATGGGAGAGGGTTTTGGTTGGATAGTTCGAAGTACGTGGTCTCTCATGTTTTGGCGAATTTTGCTGCTACCCCTGCTCTTGCCTTTCTGTGTTTTGTAGCAGTTAGGGGTGTTTCTGGTATACAAGTTTGTAGAAATGCGGAGAATCAACAGCCGTTACTTATTGATGAAGAAGAAGACGAAGAACCGGGTTGCGTTAAGGTTACTCCTTATAATGATGCTGGACTTTACAGTTTGGCTACTCTGTCTTGGCTTGACCCGATTCTTTCCATTGGTGCAAAGAGACCGCTTGAGCTTAAGGACATTCCTCTTGTTGCGCCTAAAGATAAAGCCAAAACAAATTTTAAGATTTTGAAATCTAATTGGGAGAAATTGAAGGCTGAGAACTCAGCGACTCCGCCTTCATTAGCTTGGGCACTTCTCAAATCGTTCTGGAAGGAGGCGGCTGTTAATGCCATTTTTGCTGGTGTCACTACTCTTGTCTCGTATGTAGGTCCATACATGATAAGTTACTTTGTTGATTACTTGAGTGGAATAGAGACTTACCCTCACGAGGGGTATGTCCTTGCAGGGATTTTCTTTGTTGCAAAGCTTGTGGAAACCTTTGCAACGAGACAATGGTATCTAGGAGTGGATATCTTAGGGATGCATGTTAGGTCCGCATTAACTGCGATGGTATATCAGAAGGGGCTTAAATTATCGAGTATTGCCAGGCAAAGTCACACAAGTGGCGAGATTGTTAATTACATGGCTATTGATGTTCAGAGGGTAGGGGACTATGCTTGGTATCTTCATGACATGTGGATGCTTCCTCTGCAGATTGTTCTCGCCCTTGCAATCTTGTATAAGAATGTCGGAATTGCTTCCATTGCAACACTTGTTGCCACAATCATTTCCATTGCAGTCACTATCCCTGTGGCTCGGATCCAAGAAGACTATCAAGACAAATTAATGGCTGCCAAGGATGAAAGAATGAGAAAAACATCCGAGTGCTTAAGGAACATGAGGATTCTCAAGCTGCAGGCATGGGAGGAGAGATATCGAATAAGATTGGAGGAGATGCGTGGTGTAGAGTTCAAGTGGCTTAGGAAAGCCCTATATTCTCAGGCTTTCATAACTTTCATGTTCTGGAGCTCACCTATATTTGTTTCTGCCGTCACTTTTGCTACTTGCATAATGTTGGGCGGTCAGCTAACAGCAGGCGGTGTACTTTCGGCTCTAGCTACTTTTAGGATCCTCCAAGAACCTTTGAGGAATTTTCCAGACTTGGTATCTACAATGGCTCAGACAAAAGTTTCTATTGATCGACTAACTTGTTTTCTGCTGGAGGAAGAATTGCAGGAAGATGCAACTATTGTCTTGCCACGGGGTGTTTCTAACATTGCCATAGAAATCAAGGACAGTGAATTCTCTTGGGACCCTTCTTCATCTTGCAGGCCTACGCTTTCAGAGATAAATATGAAAGTTGAAAAAGGGATGCGCGTGGCTGTTTGTGGTACGGTTGGTTCAGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGGGAGATTCCTAAGATTTCTGGTGAAGTCAGTGTGTGTGGTTCTGCTGCATATGTCTCCCAATCAGCATGGATACAATCAGGAACTATAGAAGAAAATATACTCTTTGGAAGTATAAAAGACAAAGCAAAGTACAAGAATGTTCTTCATGCTTGTTCACTGAAAAAGGATCTAGAACTTTTCTCGCATGGAGATCAGACAATTATTGGTGATAGAGGCATAAACCTGAGCGGGGGTCAGAAGCAGCGGGTGCAGCTTGCCCGGGCACTATACCAAGATGCTGATGTTTATCTCCTTGACGATCCCTTCAGTGCAGTTGATGCACACACTGGATCAGAGTTGTTTAGGGAATATATATTGTCGGCACTGGAAAATAAAACAGTCATTTTTGTGACCCATCAAGTTGAATTTCTTCCTGCTGCTGATCTGATACTGGTTCTCAGGGAAGGTAGCATCATACAGGCTGGAAAGTATGACGATCTCTTAAAAGCAGGAACAGATTTTAAAGCTCTAGTTTCAGCTCACCATGAAGCTATAGAGGCTATGGATATCCCTAATCACTCATCTGAAGATTCAGAGGAACATTTATCATTAGAGGAATCTGTTATGACAAGTAAGAAATCCATTTGTTCTGTGAATGATGTTGACAGTTTGACAAAGGAAATGCAAGAGGGACCATCGTCTTCCGATCAACAAACAACTAAGGAGAAGAAGAAAGCTAAAAGATCGAGAAAAAAACAGCTTGTACAGGAAGAGGAGAGGGTTAGAGGTAGAGTTAGCATGAAGGTGTATCTTTCATACATGGCAGCGGCATATAAAGGTGCATTGATTCCACTCATAATCATTGCACAAGCATTATTTCAGTTCCTTCAGATTGCTAGTAATTGGTGGATGGCGTGGGCTAACCCTCAAACAGAAGGAGACAAGCCCAAAGTAACTCCCATGAATCTTCTTCTTGTTTACATGGCCCTCGCTTTTGGCAGTTCATTGTTTATATTTGTTAGGGCTGTTCTAGTCGCTACGTTTGGTCTCGGAGCTGCACAGAAGCTATTTTTGAAGATGCTTAGATGTGTTTTCCATGCACCAATGTATTTCTTTGATTCTACACCCGCTGGAAGGATCTTGAACCGGGTTTCTGTTGATCAGAGTGTTGTGGATCTTGACATCCCTTTTAGACTCGGTGGGTTTGCTGCTACAACAATACAGCTTATTGGTATTGTTGGTGTAATGACAGAAGTTACATGGCAAGTTTTGCTCTTAGTCATCCCAATGGCCATTGCTTGTTTATGGATGCAGAAATACTACATGGCTTCCTCTAGGGAATTGGTGCGTATTGTAAGCATCCAGAAATCACCAATTATAAATCTTTTTGGTGAATCGATTGCTGGAGCATCCACAATCAGGGGTTTCGGACAAGAAAAAAGGTTCATGAAGCGGAACCTTTATCTTCTTGATTGTTTTGCACGACCTTTCTTCTACAGTCTTGCTGCTATTGAGTGGCTCTGCCTGCGTATGGAACTCCTGTCCACCTGTGTATTTTCTTTCTGCATGCTATTGCTTGTTAGCTTTCCCCATGGAAGTATTGACCCTAGCATGGCTGGACTTGCTGTGACATATGGTCTGAATTTAAATGCGCGGTTATCCCGTTGGATACTTAGCTTTTGCAAACTTGAAAACAAAATTATATCAATTGAAAGAATTTATCAATACAGCCAAATTCCTAGTGAAGCACCGGCAGTTATTGAAGATTCCCGCCCTCCATCCTTATGGCCTGAAAATGGGACAATTGAAATAATTGATTTGAAGGTCCGTTACAAAGAAAATCTTCCTTTGGTACTTCATGGAGTATCATGCACATTTCCTGGTGGGAAGAATATAGGAATAGTTGGACGCACCGGCAGTGGCAAATCTACGTTAATTCAAGCATTGTTTCGACTGATTGAACCAGCAGACGGAAGTATCCACATAGACAACATCAATATTTTAGAGATCGGTCTTCATGACCTCCGAAGTCATCTCAGTATCATACCACAGGATCCAACCTTGTTTGAAGGGACCATTCGAGGAAATCTTGATCCTCTTGAGGAGCACTCAGATAAAGACATTTGGGAGGCACTAGATAAGTCTCAACTTGGACAGATCATCCGTGAGAAAGGACAAAAGCTTGATACACCAGTTATAGAAAATGGAGACAATTGGAGTGTAGGACAGCGGCAACTTGTTTCTCTCGGCCGAGCTCTATTGAAGCAGTCAAAAATACTTGTACTTGATGAAGCAACAGCATCCGTCGACACTGCCACTGATAATCTTATCCAGAAGATTATTCGAACAGAGTTCAAAGCCTGCACCGTGCTCACCATTGCACATCGTATCCCTACTGTCATTGACAGCGATCAAGTTCTGGTGCTCAGTGATGGTAGAGTTGCTGAATTCGACACTCCTTTACGACTATTAGAGGATAAGTCATCCATGTTTCTAAAGTTGGTGTCTGAGTATTCATCACGGTCGAGTGGTATACCAGAATTTTAG 4626 0.4185 MGFDETLVTWLSSSGSWRKNTLLTEILGLPVLELVAICTNLVVLVLFLLRQIFLCFGGRVWFYKDNNSINNSTVVVGNGGLIRGSVVGETFEVRIGTWFKLSVLSCFYVLLVQVFVLGFDAVSLIKDEFVVVDLSLLSAPFVQGLVWIVLSFSVLHCKYRVSQKFPILLRVSWFVLFVVCLCGLYVDGRGFWLDSSKYVVSHVLANFAATPALAFLCFVAVRGVSGIQVCRNAENQQPLLIDEEEDEEPGCVKVTPYNDAGLYSLATLSWLDPILSIGAKRPLELKDIPLVAPKDKAKTNFKILKSNWEKLKAENSATPPSLAWALLKSFWKEAAVNAIFAGVTTLVSYVGPYMISYFVDYLSGIETYPHEGYVLAGIFFVAKLVETFATRQWYLGVDILGMHVRSALTAMVYQKGLKLSSIARQSHTSGEIVNYMAIDVQRVGDYAWYLHDMWMLPLQIVLALAILYKNVGIASIATLVATIISIAVTIPVARIQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEERYRIRLEEMRGVEFKWLRKALYSQAFITFMFWSSPIFVSAVTFATCIMLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSIDRLTCFLLEEELQEDATIVLPRGVSNIAIEIKDSEFSWDPSSSCRPTLSEINMKVEKGMRVAVCGTVGSGKSSFLSCILGEIPKISGEVSVCGSAAYVSQSAWIQSGTIEENILFGSIKDKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADVYLLDDPFSAVDAHTGSELFREYILSALENKTVIFVTHQVEFLPAADLILVLREGSIIQAGKYDDLLKAGTDFKALVSAHHEAIEAMDIPNHSSEDSEEHLSLEESVMTSKKSICSVNDVDSLTKEMQEGPSSSDQQTTKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYKGALIPLIIIAQALFQFLQIASNWWMAWANPQTEGDKPKVTPMNLLLVYMALAFGSSLFIFVRAVLVATFGLGAAQKLFLKMLRCVFHAPMYFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFAATTIQLIGIVGVMTEVTWQVLLLVIPMAIACLWMQKYYMASSRELVRIVSIQKSPIINLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFYSLAAIEWLCLRMELLSTCVFSFCMLLLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPAVIEDSRPPSLWPENGTIEIIDLKVRYKENLPLVLHGVSCTFPGGKNIGIVGRTGSGKSTLIQALFRLIEPADGSIHIDNINILEIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLEEHSDKDIWEALDKSQLGQIIREKGQKLDTPVIENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKIIRTEFKACTVLTIAHRIPTVIDSDQVLVLSDGRVAEFDTPLRLLEDKSSMFLKLVSEYSSRSSGIPEF 1541
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03730 1541 ProSitePatterns ABC transporters family signature. 775 789 IPR017871 GO:0005524|GO:0016887
Vivi6g03730 1541 Pfam ABC transporter 1312 1460 IPR003439 GO:0005524
Vivi6g03730 1541 Gene3D - 1278 1530 IPR027417 -
Vivi6g03730 1541 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1295 1529 IPR003439 GO:0005524
Vivi6g03730 1541 SUPERFAMILY ABC transporter transmembrane region 975 1275 IPR036640 GO:0005524|GO:0016020
Vivi6g03730 1541 CDD ABCC_MRP_domain1 649 850 - -
Vivi6g03730 1541 SUPERFAMILY ABC transporter transmembrane region 323 629 IPR036640 GO:0005524|GO:0016020
Vivi6g03730 1541 Pfam ABC transporter transmembrane region 339 603 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi6g03730 1541 Pfam ABC transporter transmembrane region 978 1220 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi6g03730 1541 Gene3D - 629 894 IPR027417 -
Vivi6g03730 1541 FunFam ABC transporter C family member 5 939 1276 - -
Vivi6g03730 1541 CDD ABC_6TM_ABCC_D2 976 1270 IPR044726 GO:0140359
Vivi6g03730 1541 FunFam ABC transporter C family member 5 634 882 - -
Vivi6g03730 1541 SMART AAA_5 1321 1506 IPR003593 GO:0016887
Vivi6g03730 1541 SMART AAA_5 677 858 IPR003593 GO:0016887
Vivi6g03730 1541 Gene3D ABC transporter type 1, transmembrane domain 937 1276 IPR036640 GO:0005524|GO:0016020
Vivi6g03730 1541 Gene3D ABC transporter type 1, transmembrane domain 302 628 IPR036640 GO:0005524|GO:0016020
Vivi6g03730 1541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 645 872 IPR027417 -
Vivi6g03730 1541 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 338 615 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi6g03730 1541 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 649 873 IPR003439 GO:0005524
Vivi6g03730 1541 FunFam ABC transporter C family member 10 318 631 - -
Vivi6g03730 1541 CDD ABCC_MRP_domain2 1293 1513 - -
Vivi6g03730 1541 CDD ABC_6TM_ABCC_D1 336 623 IPR044746 GO:0140359
Vivi6g03730 1541 Pfam ABC transporter 668 802 IPR003439 GO:0005524
Vivi6g03730 1541 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 978 1248 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi6g03730 1541 MobiDBLite consensus disorder prediction 918 950 - -
Vivi6g03730 1541 FunFam ABC transporter C family member 3 1278 1530 - -
Vivi6g03730 1541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1285 1525 IPR027417 -
Vivi6g03730 1541 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 258 1532 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi6g03730 Vivi-Chr6 132313797 132320655 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03730 649 866 Calmodulin-binding Proteins AT2G36910 31.197 8.02e-22 101
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03730 - - gmx:100790550 2502.63