Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03722 ATGAAAATGCAAATGAAAACACAGTTTTTCATTTTCTTCTGTTACATTGTCTATTTTTGTTTCTCTTACAGTTTTTCTGCTGCTTCGAAGAATGATGAACTATCAGCTTTGCTTTCGATAAAATCGGGTCTTATTGATCCCTTGAACACTCTTCATGATTGGAAGTTGGATTCACCTCATTGTAACTGGACCGGAATCAAATGCAACTCGGCCGGAACCGTGGAGAATCTCGACCTCTCTCACAAGAATCTCAGTGGTATAGTATCCAACGACATACAAAGGCTTCAATCTCTTACTTCTCTTAACCTATGTTGCAATGCATTTTCATCAAAATTACCGAAATCTATATCCAATCTCACCACACTGAACATTCTTGATGTAAGTCAGAATTTCTTCATTGGTGAGTTTCCATTAGGACTTGGAAAAGCGTCGAGATTAACATCGTTAAATGGCTCGAGCAATGAATTCTCAGGTCCAATTCCTTTGGACCTTGGAAATGCAACTTTGTTAGAAATGCTTGATCTTAGAGGCAGTTTCTTTGAAGGTTCAATTCCGAAAACATTTGGAAACTTGCATAAGTTGAAGTTTCTTGGTTTATCTGGGAATAATCTCACTGGAAAAATTCCTGGTGAGCTTGGAAAACTTTCATCATTGGAGTATATGATTCTCGGATACAACGGGTTGAAAGGTGAGATTCCATTCGAATTCGGAAATCTCACTAGTCTTAAGTATCTTGATTTAGCAGTTTCCAATCTTGGTGGTGAGATTCCATATGAATTGGGAAATCTCAAGTTATTGAATACACTTTTCTTGTATAACAACAATTTTGAAGGAAGAATTCCATCACAAATTGGTAACATGACTTCTTTGCAGTTTTTCGATCTTTCTGATAACATTCTGTCAGGAAAAATTCCAGATGAAATAGGTCTGCTGAAAAATCTGAAGCTTCTGAACTTCATGGGAAACCAGTTATCTGGTTTTGTTCCTTCTGGCATTGGGAATTTGCCTCAATTGGAGGTTCTTGAGCTATGGAACAATTCATTATCAGGTCCATTACCGAGCAACCTTGGCGAAAATTCACCGTTGCAATGGTTGGATGTATCGTCCAATTCGATCTCTGGAGAGATTCCAGAAACTCTTTGCAGCCAAGGAAATCTCACCAAGCTAATTCTTTTCAACAATGCTTTCTCCGGTTCAATTCCATCGAGCTTATCGAAATGTTCTTCACTGGTTCGTGTCCGAATTCAGAACAATTTTCTATCTGGATCAGTTCCTGTTGGTCTTGGCAAGCTTGAGAAGCTTCAAAGGTTAGAATTAGCTAACAATAGTCTCACTGGTGAAATTCCAGATGATATTCCTTCTTCAACATCTCTTTCTTTCATTGATCTCTCAAGAAACAAACTCCATTCTTCTCTACCTTCCACTATTCTCTCCATTCCAAATCTCCAAGTTTTCATGGTCTCCCACAACAACTTAGAAGGTAAAATACCAAACCATTTTCAGGATTCTCCTTCACTTACTGTTCTTGATCTCTCGTCGAATCATTTATCCGGAGCCATTCCAGAAAGCATAGGTTCATGTCAAAAGCTAGTAAATTTGAACCTGCAAAACAACCTTTTGATTGGTGAAATCCCAAAAGCACTAGCTAACATGCCTACAATGGCAATGCTTGATCTTTCCAACAACTCTTTGACCGGTCATATACCTGAGAACTTTGGTTTATCGCCAGCTTTGGAAGCATTTAATGTTTCATACAACAAGCTCGAAGGTTCTGTGCCAGATAATGGTATGCTAAGAACTATAAACCCGAACAATCTCGTTGGAAATGCTGGCCTATGTGGTGGAATCCTCCCTTCATGTGACCAAAACTCGGCATACTCCTCAAGATATGGAAGTTCACATGCAAAGCATATTATCACAGGGTGGATCATTGGAATATCATCAATTCTAGCCATTGGAATTACAATCTTGTTAGCAAGATCTTTATACGTAAGGTGGTACACCGGTGGATTTTGCTTCAAAGAGAGATTTTATAAAGGTAACAAGGGGTGGCCATGGCGATTAATAGCATTTCAGAGACTTGGTTTTACAAGTACTGACATTCTAGCTTGCATCAAGGAAACAAATGTGATCGGAATGGGAGCTACCGGCGTTGTTTACAAAGCCGAGGTACCGCAATCCAATACAATTGTAGCAGTGAAAAAGTTGTGGAGATCAGGAAATGATGTTGAAGTAGGAAGAGGCAGCGATGAGCTTGTTGGAGAAGTGAACCTCTTAGGGAGACTAAGACACAGGAACATTGTTAGACTATTAGGATTTCTTCACAATGACACTGATTTGATGATAGTTTATGAATTTATGCATAATGGAAACCTAGGAGATGCCTTGCATAGTAAGCAAGCTGTTAGACAGCTTGTTGATTGGGTTTCAAGATATAACATAGCTCTTGGAGTTGCTCAAGGACTTGCTTATCTTCATCACGACTGTTATCCGCCTGTTATCCATCGTGACATTAAGTCAAACAATATACTGCTTGATGCAAATCTTGAAGCAAGGATAGCAGATTTTGGTTTAGCGAAAATGATGATCCGGAAGAACGAAACCGTCTCCATGGTTGCTGGATCCTATGGCTACATTGCTCCTGAATATGGATATGCATTGAAGGTGGATGAAAAGATTGATGTATACAGTTATGGAGTAGTTTTGTTGGAGCTTGTGACAGGAAAGAGGCCACTAGACGCGGAATTCGGAGAGAGTGTAGACATTGTAGAGTGGATTAGAAGGAAGATCAGAGACAAGAAATCTCTAGAAGAAGCATTAGATCCAAGTGTAGGAAACTGCAGGCATGTTATAGAAGAAATGCTTTTAGTTTTAAGAATAGCAGTAGTTTGCACTGCTAAGCTTCCTAAAGACAGACCAAGCATGAGGGATGTGATAATGATGCTTGGAGAAGCAAAGCCTAGAAGAAAGATCAGTGGAAACAGTGAAACATCTTTAGCAGCTAACAACAATAACAAGGAGATGTCAGTTTTTAGTACATCACCAGTTAGTGGTCTTCTCTAG 3063 0.3928 MKMQMKTQFFIFFCYIVYFCFSYSFSAASKNDELSALLSIKSGLIDPLNTLHDWKLDSPHCNWTGIKCNSAGTVENLDLSHKNLSGIVSNDIQRLQSLTSLNLCCNAFSSKLPKSISNLTTLNILDVSQNFFIGEFPLGLGKASRLTSLNGSSNEFSGPIPLDLGNATLLEMLDLRGSFFEGSIPKTFGNLHKLKFLGLSGNNLTGKIPGELGKLSSLEYMILGYNGLKGEIPFEFGNLTSLKYLDLAVSNLGGEIPYELGNLKLLNTLFLYNNNFEGRIPSQIGNMTSLQFFDLSDNILSGKIPDEIGLLKNLKLLNFMGNQLSGFVPSGIGNLPQLEVLELWNNSLSGPLPSNLGENSPLQWLDVSSNSISGEIPETLCSQGNLTKLILFNNAFSGSIPSSLSKCSSLVRVRIQNNFLSGSVPVGLGKLEKLQRLELANNSLTGEIPDDIPSSTSLSFIDLSRNKLHSSLPSTILSIPNLQVFMVSHNNLEGKIPNHFQDSPSLTVLDLSSNHLSGAIPESIGSCQKLVNLNLQNNLLIGEIPKALANMPTMAMLDLSNNSLTGHIPENFGLSPALEAFNVSYNKLEGSVPDNGMLRTINPNNLVGNAGLCGGILPSCDQNSAYSSRYGSSHAKHIITGWIIGISSILAIGITILLARSLYVRWYTGGFCFKERFYKGNKGWPWRLIAFQRLGFTSTDILACIKETNVIGMGATGVVYKAEVPQSNTIVAVKKLWRSGNDVEVGRGSDELVGEVNLLGRLRHRNIVRLLGFLHNDTDLMIVYEFMHNGNLGDALHSKQAVRQLVDWVSRYNIALGVAQGLAYLHHDCYPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELVTGKRPLDAEFGESVDIVEWIRRKIRDKKSLEEALDPSVGNCRHVIEEMLLVLRIAVVCTAKLPKDRPSMRDVIMMLGEAKPRRKISGNSETSLAANNNNKEMSVFSTSPVSGLL 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03722 1020 FunFam MDIS1-interacting receptor like kinase 1 705 790 - -
Vivi6g03722 1020 SUPERFAMILY RNI-like 197 565 - -
Vivi6g03722 1020 Gene3D Transferase(Phosphotransferase) domain 1 787 1008 - -
Vivi6g03722 1020 PANTHER UNNAMED PRODUCT 170 915 - -
Vivi6g03722 1020 FunFam MDIS1-interacting receptor like kinase 1 791 1001 - -
Vivi6g03722 1020 Gene3D Ribonuclease Inhibitor 281 379 IPR032675 -
Vivi6g03722 1020 SMART LRR_typ_2 551 574 IPR003591 -
Vivi6g03722 1020 SMART LRR_typ_2 335 359 IPR003591 -
Vivi6g03722 1020 SMART LRR_typ_2 431 455 IPR003591 -
Vivi6g03722 1020 SMART LRR_typ_2 504 527 IPR003591 -
Vivi6g03722 1020 SMART LRR_typ_2 311 334 IPR003591 -
Vivi6g03722 1020 SMART LRR_typ_2 263 287 IPR003591 -
Vivi6g03722 1020 SMART LRR_typ_2 191 215 IPR003591 -
Vivi6g03722 1020 SMART LRR_typ_2 95 119 IPR003591 -
Vivi6g03722 1020 Gene3D Ribonuclease Inhibitor 177 280 IPR032675 -
Vivi6g03722 1020 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 179 279 - -
Vivi6g03722 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Vivi6g03722 1020 Pfam Protein kinase domain 707 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03722 1020 SUPERFAMILY Protein kinase-like (PK-like) 702 982 IPR011009 -
Vivi6g03722 1020 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Vivi6g03722 1020 Pfam Leucine rich repeat 457 516 IPR001611 GO:0005515
Vivi6g03722 1020 Pfam Leucine rich repeat 170 228 IPR001611 GO:0005515
Vivi6g03722 1020 Pfam Leucine rich repeat 529 588 IPR001611 GO:0005515
Vivi6g03722 1020 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 30 178 - -
Vivi6g03722 1020 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 364 624 - -
Vivi6g03722 1020 Gene3D Ribonuclease Inhibitor 380 621 IPR032675 -
Vivi6g03722 1020 Gene3D Phosphorylase Kinase; domain 1 697 786 - -
Vivi6g03722 1020 Gene3D Ribonuclease Inhibitor 29 176 IPR032675 -
Vivi6g03722 1020 ProSitePatterns Protein kinases ATP-binding region signature. 711 735 IPR017441 GO:0005524
Vivi6g03722 1020 SUPERFAMILY L domain-like 50 266 - -
Vivi6g03722 1020 SMART serkin_6 705 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03722 1020 ProSiteProfiles Protein kinase domain profile. 705 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03722 1020 FunFam Leucine-rich repeat receptor protein kinase EMS1 280 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03722 Vivi-Chr6 132161412 132165013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03722 3 1020 Receptor kinase-like Gene Family AT1G08590 59.712 0.0 1187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi6g03722 Pkinase 5.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03722 - - gmx:100789665 1624.76