Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03709 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTTCATGCAAAATTATCAAAATCCTAATCCTCAAAATTCTCAAATTCCACCGATGCCACCATTTTCTACTCAAGTTCCCCCATTTTCTACTCAAGTTCCACCATTTCCTACTCAAGTTCCACCATTTTCTACTCAAGATCCAATTGTGGGAGTTGATCAAAAGGCTGAGAGTTTTTGGGTAAGAGTCGCTGTCAATTATAACGAGTATCGTGGGCAATCGCGGGAAAAGTTAAAGGGACAATTAAAGTGTCGATGGCATCGAATAAATAGCTTGGTTCAAAAATTTGTTGGGTGTTACAAACAGGCTGTTAATGGAAAGAAAAGTGGGACATCAAAGAACGATATCATGGCCGCTGCAAATGCATTTTTTGCTCAGGATCAAGGTACAACATTCAATCTTGAGTACGCATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAGTTCTTCAAAAATAACAAAGACTTATGTTAGTGAGGCATCATCGGATAATCCAAATACACCTTCAAGTTATGAGTTTACCTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGCAACGTAA 663 0.3846 MDPNHFHYQQAMFNFMQNYQNPNPQNSQIPPMPPFSTQVPPFSTQVPPFPTQVPPFSTQDPIVGVDQKAESFWVRVAVNYNEYRGQSREKLKGQLKCRWHRINSLVQKFVGCYKQAVNGKKSGTSKNDIMAAANAFFAQDQGTTFNLEYAWRLLKDEPKWMGESIGSSSKITKTYVSEASSDNPNTPSSYEFTSSSPMERPMGQKAAKRKGKAKEIPNAT 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03709 220 MobiDBLite consensus disorder prediction 175 200 - -
Vivi6g03709 220 MobiDBLite consensus disorder prediction 203 220 - -
Vivi6g03709 220 PANTHER - 58 216 - -
Vivi6g03709 220 MobiDBLite consensus disorder prediction 175 220 - -
Vivi6g03709 220 Pfam No apical meristem-associated C-terminal domain 144 212 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03709 Vivi-Chr6 131897047 131897816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03709 62 212 Glutathione S-transferase Gene Family AT5G41240 32.927 1.89e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03709 - - vvo:131630238 369.007