Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03701 ATGACAACTATAGGTCTGCAAGAAATTCGTCCTCCAACTCTTTCTCCAACTTCCGAACCACCACCGCTTTTCGATGGAACTACCAGGTTATACATGAGCTATACATGCCCATTTGCACAACGTGTATGGATCACTAGGAACCATAAGGGACTACAAGACAAGATCAAATTGGTTCCTCTTGATCTTCAGAACAAACCTGCTTGGTACAAAGAGAAAGTCCACCCAGAAAATAAGGTGCCCTCTCTCGAACACGATGGCAAGGTTATCGATGAAAGTATTGACTTGATCAAATATGTTGAGGCAAATTTTGAAGGACCATCACTAGTGCCTAATGATTCAACCAAGAAGGAATTTGGAGAGGAGTTAATAAAGTATGCTGATACTTTTACCAAAGATGTGTATGGTTCATTCAAGGGTGATCCTGTAACACAAACAAGTGCTTCATTTGACTATTTGGAGAATGCTCTTGGCAAATTTGATGGGCCATTCTTCCTTGGTGAATTTAGTTTGGTGGATATTGTGTATATTCCATTCATTGAAAGGTTCCAAATTGTTTTCTCGGAATTGTTTAAGCATGATATCACAGATGGAAGGCCTAAATTTGCAGCATGGATTAAGGAGCTGAACAAAAATGATGCTTATAAGCAGACAAAACTTGCTAATCCACAAGAATTCGTTGGCTTTATCAAGAGGATCTTCTTGGGACAGAAGTAA 714 0.3936 MTTIGLQEIRPPTLSPTSEPPPLFDGTTRLYMSYTCPFAQRVWITRNHKGLQDKIKLVPLDLQNKPAWYKEKVHPENKVPSLEHDGKVIDESIDLIKYVEANFEGPSLVPNDSTKKEFGEELIKYADTFTKDVYGSFKGDPVTQTSASFDYLENALGKFDGPFFLGEFSLVDIVYIPFIERFQIVFSELFKHDITDGRPKFAAWIKELNKNDAYKQTKLANPQEFVGFIKRIFLGQK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03701 237 Gene3D - 105 236 - -
Vivi6g03701 237 Gene3D Glutaredoxin 1 104 - -
Vivi6g03701 237 MobiDBLite consensus disorder prediction 1 22 - -
Vivi6g03701 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Vivi6g03701 237 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
Vivi6g03701 237 FunFam Lambda class glutathione S-transferase 105 236 - -
Vivi6g03701 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 6 233 IPR044629 GO:0004364
Vivi6g03701 237 SFLD Main (cytGST) 29 210 - -
Vivi6g03701 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Vivi6g03701 237 SUPERFAMILY Thioredoxin-like 19 108 IPR036249 -
Vivi6g03701 237 SUPERFAMILY GST C-terminal domain-like 103 232 IPR036282 -
Vivi6g03701 237 Pfam Glutathione S-transferase, C-terminal domain 143 206 - -
Vivi6g03701 237 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03701 Vivi-Chr6 131722727 131725017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03701 8 234 Glutathione S-transferase Gene Family AT5G02790 68.421 3.00e-112 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03701 K00799 - gmx:100793025 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03701 6 131722727 131725017 Vivi1g06843 1 161852872 161855875 ECH
Vivi6g03701 6 131722727 131725017 Vivi6g03701 6 131722727 131725017 ECH
Vivi6g03701 6 131722727 131725017 Vivi1g06843 1 161852872 161855875 PCT