Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03695 ATGTGTTCACTTTTAAGGACAGAGTCTCAGGAAATTCGCTTTGCGGGGATATGGGGCATGGGTGGCATAGGAAAGACAACTCTAGCCAAACTTGTGTATAAGAAAATCCATAACCAATTTGATTTCAGTTGCTTTCTTGAGAATATTAGAGAGGTTTCTAGCGAAAGAGATGGTCTGCTTTGCTTACAAAGAAAATTGCTTTCAAATCTAAAAATAAGCAGCTTGAGAATTGAAAGTTTGGACCAAGGAAAGGAGACAATACGGAATCTTTTATTCAACAAAAAAGTTCTCCTTGTCCTTGATGACCTAAGTTCTGATATCCAACTAGAGAATTTAGCTGGAAAGCAAGAATGGTTTGGTCCTAGAAGCAGGGTAATAATAACAACTAGAGACAGGCATCTCCTAGTATCACTAGGCGTGTGTGAAACTTATGATGCTCAAATCTTAAACAGAGATGAATCCCTTCAACTTTTTTGTCAAAAAGCTTTTAGAAGAGCAAAACCTAAAGAAGATTTCATTGAGTTATCAAAACGGGTGGTTCAATATGCCGGAGGTATTCCTTTGGCACTCAAAGTGTTGGGTTCATTCCTTTGTGGACGAAGGGCATCTGTATGGGAAGATGCGTTGAAAATATTGCAGCAGGATCTGCAAAATGATGTTTACAAGACATTAAGAATAAGTTACGATGGATTGCGGGATATGGAAAAGGCAATATTCTTAGATATTGCTTGTTTTTTCAAAGGGAAGCCCAAGGATCATGTAACACAAATATTGAAAAAATGTGGTCTTAATCCATTGATAGCTATAGATGTTCTTATTGAAAAATCATTGATAACTGATGATGGGTGGCATTTGGGGATGCACGATTTGCTGCAAGAAATGAGTAGAAATATTGTTCTGCATGAATCTCTTAATGATGCCAGTAAGCGGAGTAGGTTGTGGTCTGTCAAGGACATTGATCAAGTATTGAGAAGTAATAAGGGAACTGAATCCACTCAAGCTGTAGTTCTAAGTCTTCCTGAAGCATTCGAAGCAAGTTGGAACCCTGAAGCTTTTGCAAAGATGGGTAATCTTAGATTGCTCATGATACTAAATAAATTGCAACTTCCACTTGGTCTCAAATGTCTTCCCAGTGGGTTAAAAGTGCTTGTGTGGAGGGAATATCCTCTCGAGTCATTGCCAGTTGGAGACCAGTCGAATGAACTTGTTGACCTTGATATGTGTCATAGCAAAATAAAGCACCTTTGGAGAGGAATGAAGCTTCTGGAAAATTTGAAGACCATTAATTTGAGAAATTCCAAAAATCTACATCAAACTCCAGATTTCACTGGAATTCCAAATCTTGAAAAATTGGATCTTGAAGGCTGCATAAACCTGGTTGAGGTTCATGCTTCTCTTGGACTTCTTAAAAAGCTTTCATATGTGACATTAGAAGATTGCAAAAATCTTAAAAGCCTTCCGGGAAAATTGGAAATGAATTCTTTGAAGCTTCTCATTCTATCAGGCTGCACAGCAGTTAGAAAGCTTCCTGATTTTGGGGAAAGCATGACAAATCTATCCATACTTGCTTTGGATGAGATTTCCATAGCTGAACTACCTCCAACTATTGGTTACTTGACAGGTCTTCATAGCTTGGTTTTACGGGAATGTAAAAATATTGTTTCCCTTCCAAATACCTTTTCTAAGTTGAAATCTCTCAAAAGGCTCAACCTATCTGGTTGCTCAAAATTTTCCAAGCTTCCTGATAATTTGCATGAAAATGAGGCTTTGGAGTGTCTTAATGTGAGTGACAGTGCTATAAGAGAAGTTCCTCCATCCATTGTCCATTTGAAAAATCTTGTATTACTTTTATTTTATGGATGCAAAGGAATTGCATGGACCTCAGAGAGCTCCCGCCTCCCTTTGGGTAAGTTTTTCAGGTTTGGTACTCATACAATGCCCAAGAAATTGATCTTACCTTCTTTTTCTGGTTTATCCTCATTGAAGAAACTAGATTTAAGCTATTGCAATCTCTATGATGAATCAATTCCGGATGATCTTGGCTGTTTATCATCATTGGTAACATTAGATTTAAGTGGGAACAATTTTGTGAACCTTCGTGATGGCTGCATATCTAAACTATCAAAGCTAGAAAGACTTGAGTTGAAGAGTTGCCAAAACCTGCAATCATTGCCTAAGTTACCACCAAATGTACATTTTGTAAATGCAAGTGATTGTGGTTCAATGGAACCCTTATCAAATCCACAAGAGATATGGGGTCACTTGGCATCATTTGCCTTTGACAAGTTGCAAGATGCAAGTCCAATTAAAACTTTAATGGTAAGTCCTGGAAACGAAATTCCGTCAACATTTTTCTATCAAAATTATTTTGATCGGGACATACAATATTTAAAAGATAACTACATATGGGCTGATTCTACTGTGTCAATATCAACGGATATAGCTCAGTTTCGTCAACGGTATGATAGAAGTGAGTGGTGGGGAATGTTAGTCTGTCTTGTCGTAGAAGATGTGGCTTCTTCTACACCTTCCCAGGACTATCGTGTCGGTTGGATTTCAAAAGTTCCTGCCACTACAAATAATATTTTGGGTCAGCTATGTCAAAAGTTGTTGGAGCATGGTTTCATTTCTGGGGTACCAAATTCCAAGCACCCTCATCTATTGGTTTTGTATATTCCTGTTCCTTCATCCCGTTGGTGTTATGTTCAAGACAAGTTTCAGTTAATATTTTTCAGCTCTAGTCTTAAGAGTAAGTTAGTTATAAAGAAATGTGGGTGGCGTGTATTATGTAAGGAAGATGCACAACTCATGCGCAAAAGTCTGCCTGAATGCAGTACTTCTTCTGCCAACCAATGTGTCTCACGAGAAAATTGCTTATCTTCTTCTCCTTTAACATCTTGGAGATGGATAAGCCATCTCAAGGTTCCCCGATGTTTCAAGACTTTCCTGTTGGCAGTCCTATGTGAACGCTTGCCTACTATTGCAAAGTGCAGGTTCTGTACCATGGAAGCGACTCCTACTATCCATGTTTTAAGAGACTGTAGGCGAGCTTGTGCAATTTGGGTTCAAATGGTTCCTCCTCAAGTGTGTGAAGAGTTTTTTTCAATTTCTCTTCATGATTGGATGCATAGGTTCCTTCGGAAGTCCTGGTTGCCAAATAACTGTGAAGACTATGATGCTGACTGCTTGAGGTTTTCAGTCACCACTTTTCTTCTCTGGAAGGATGGAAATAATTCCATCCCTGAGGGAGATTCTCTAACAGATAATGGTTTGTATTCTATGATCAAGTCTCTAGTACAAGAACACACCTCACCTACCAGGCATTTTGTTAAGTTGAATGTGGACAGTTGTTGCATGGAAAATCCTAGAAATGCTGGTTATGGGGGTCTCTTTCGTGATGTGGAGGGGAATTGGCTTGGTGGGTTCTATGGCTCTCTGGGCTTTGCAACTAACATGAAAGCTGAGCTTTATGCCATTTGTCAAGGTTTGATCACTGCTTGGGATTTGGGTTACAAAAATATGTTAGTTGAAACTGATTCTTTGGAAGCTATCAATCACATTGAAGAGGCCAATATTGAACACGATGCCTATCGTAGCTTGGTGGCTGACATACGCTCCCTCATGAAAAGAAATTGGTCCCTAAATTTGGTCCATTCTCTCAGAGAAGATAATGCTTGTGCAGATATTTTATCGAGACTTGGAGCTGAGCAGCACGAGGTCTATTGCTTCCATGCTTATCCACCACAACAGCTTCAGCGGGCATTGATTGCCGATGCCCTCCGTGTTCAACTTCCTTCCATGTAG 3804 0.3927 MCSLLRTESQEIRFAGIWGMGGIGKTTLAKLVYKKIHNQFDFSCFLENIREVSSERDGLLCLQRKLLSNLKISSLRIESLDQGKETIRNLLFNKKVLLVLDDLSSDIQLENLAGKQEWFGPRSRVIITTRDRHLLVSLGVCETYDAQILNRDESLQLFCQKAFRRAKPKEDFIELSKRVVQYAGGIPLALKVLGSFLCGRRASVWEDALKILQQDLQNDVYKTLRISYDGLRDMEKAIFLDIACFFKGKPKDHVTQILKKCGLNPLIAIDVLIEKSLITDDGWHLGMHDLLQEMSRNIVLHESLNDASKRSRLWSVKDIDQVLRSNKGTESTQAVVLSLPEAFEASWNPEAFAKMGNLRLLMILNKLQLPLGLKCLPSGLKVLVWREYPLESLPVGDQSNELVDLDMCHSKIKHLWRGMKLLENLKTINLRNSKNLHQTPDFTGIPNLEKLDLEGCINLVEVHASLGLLKKLSYVTLEDCKNLKSLPGKLEMNSLKLLILSGCTAVRKLPDFGESMTNLSILALDEISIAELPPTIGYLTGLHSLVLRECKNIVSLPNTFSKLKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSDSAIREVPPSIVHLKNLVLLLFYGCKGIAWTSESSRLPLGKFFRFGTHTMPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLDLSGNNFVNLRDGCISKLSKLERLELKSCQNLQSLPKLPPNVHFVNASDCGSMEPLSNPQEIWGHLASFAFDKLQDASPIKTLMVSPGNEIPSTFFYQNYFDRDIQYLKDNYIWADSTVSISTDIAQFRQRYDRSEWWGMLVCLVVEDVASSTPSQDYRVGWISKVPATTNNILGQLCQKLLEHGFISGVPNSKHPHLLVLYIPVPSSRWCYVQDKFQLIFFSSSLKSKLVIKKCGWRVLCKEDAQLMRKSLPECSTSSANQCVSRENCLSSSPLTSWRWISHLKVPRCFKTFLLAVLCERLPTIAKCRFCTMEATPTIHVLRDCRRACAIWVQMVPPQVCEEFFSISLHDWMHRFLRKSWLPNNCEDYDADCLRFSVTTFLLWKDGNNSIPEGDSLTDNGLYSMIKSLVQEHTSPTRHFVKLNVDSCCMENPRNAGYGGLFRDVEGNWLGGFYGSLGFATNMKAELYAICQGLITAWDLGYKNMLVETDSLEAINHIEEANIEHDAYRSLVADIRSLMKRNWSLNLVHSLREDNACADILSRLGAEQHEVYCFHAYPPQQLQRALIADALRVQLPSM 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03695 1267 SUPERFAMILY Ribonuclease H-like 1108 1238 IPR012337 -
Vivi6g03695 1267 Pfam Reverse transcriptase-like 1113 1232 IPR002156 GO:0003676|GO:0004523
Vivi6g03695 1267 Gene3D Ribonuclease Inhibitor 643 786 IPR032675 -
Vivi6g03695 1267 Gene3D - 1109 1237 IPR036397 GO:0003676
Vivi6g03695 1267 CDD RNase_H_like 1112 1232 IPR044730 -
Vivi6g03695 1267 Gene3D - 148 232 IPR042197 -
Vivi6g03695 1267 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 511 IPR044974 GO:0006952
Vivi6g03695 1267 SUPERFAMILY "Winged helix" DNA-binding domain 219 323 IPR036390 -
Vivi6g03695 1267 SMART LRR_typ_2 563 587 IPR003591 -
Vivi6g03695 1267 SMART LRR_typ_2 683 706 IPR003591 -
Vivi6g03695 1267 SMART LRR_typ_2 658 682 IPR003591 -
Vivi6g03695 1267 SMART LRR_typ_2 516 539 IPR003591 -
Vivi6g03695 1267 FunFam Disease resistance protein (TIR-NBS-LRR class) 150 232 - -
Vivi6g03695 1267 Gene3D Ribonuclease Inhibitor 319 637 IPR032675 -
Vivi6g03695 1267 PRINTS Disease resistance protein signature 561 577 - -
Vivi6g03695 1267 PRINTS Disease resistance protein signature 14 29 - -
Vivi6g03695 1267 PRINTS Disease resistance protein signature 90 104 - -
Vivi6g03695 1267 PRINTS Disease resistance protein signature 183 197 - -
Vivi6g03695 1267 Gene3D - 1 140 IPR027417 -
Vivi6g03695 1267 Pfam NB-ARC domain 5 231 IPR002182 GO:0043531
Vivi6g03695 1267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 242 IPR027417 -
Vivi6g03695 1267 SUPERFAMILY L domain-like 352 623 - -
Vivi6g03695 1267 SUPERFAMILY L domain-like 650 746 - -
Vivi6g03695 1267 ProSiteProfiles RNase H type-1 domain profile. 1106 1236 IPR002156 GO:0003676|GO:0004523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03695 Vivi-Chr6 131618132 131625344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03695 542 745 WRKY Transcription Factor Family AT5G45050 27.962 2.02e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03695 - - vvo:131622857 2471.81