Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03668 ATGCCAGAATTACAAAAGCAGGTTGAAGGATTAACTAAGAAAAAAGAAGATCTTCTATCAAGGGTTTCTAGGCAAGAATATGCAGTCAACAAAGAATCACAAAGGAAAATTAATCCCAATTATGATTCTTCTTTTGTGGTTTCAACAAGTAGGTTTAATGATAATGAGCTTGCTATTCATATTTCTTCTTATGAGGCTAACAACATTCCATTATCAGAGATCTTGATGTGCTTAGAAAATAATGGACTTGTTCTACTAAATTCTTCTTCTTCGAAAACATTTGGAGGGAGACTCTTTTACAACTTGCATTTTCAGCTGGAGAAAACTCAAAGTTTAGAGTGTGATGTTCTAATTCAGAAGCTTCTGTCAATATATGAGAAGCAATGCAATCATTCTAGTGTTGGAAGATAA 411 0.3309 MPELQKQVEGLTKKKEDLLSRVSRQEYAVNKESQRKINPNYDSSFVVSTSRFNDNELAIHISSYEANNIPLSEILMCLENNGLVLLNSSSSKTFGGRLFYNLHFQLEKTQSLECDVLIQKLLSIYEKQCNHSSVGR 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03668 136 Coils Coil 1 21 - -
Vivi6g03668 136 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 2 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03668 Vivi-Chr6 131180732 131181465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03668 1 132 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 40.000 1.03e-23 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03668 - - psat:127129084 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03668 6 131180732 131181465 Vivi6g03668 6 131180732 131181465 ECH