Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03632 ATGGCATCTAGCTCAATGTCAGCATCTAGTTCATGGAGTGTTAAGGACAACAAAGCCTTTGAAAGAGCTCTAGCGGTTTATGACAAAGACGCGCCAGATCGTTGGTACAATGTGGCTCATGCTGTTGGTGGAAAAACTGCTGAGGAAGTTAAGAAACACTATGAACTTCTTGTTCAAGATGTTAAGCGGATTGAGTCGGGAAAAGTTCCGTACCCAAATTACAAGAAAAATTCAGGCTCTCAAGAAGAGAAAAGGATGAGGAACTTGAGCCTTCATTGA 279 0.4229 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTAEEVKKHYELLVQDVKRIESGKVPYPNYKKNSGSQEEKRMRNLSLH 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03632 92 CDD SANT 18 58 IPR001005 -
Vivi6g03632 92 MobiDBLite consensus disorder prediction 68 92 - -
Vivi6g03632 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Vivi6g03632 92 FunFam Transcription factor SRM1 4 71 - -
Vivi6g03632 92 Gene3D - 2 71 - -
Vivi6g03632 92 SUPERFAMILY Homeodomain-like 11 65 IPR009057 -
Vivi6g03632 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 86 IPR044636 GO:0003700
Vivi6g03632 92 SMART sant 8 60 IPR001005 -
Vivi6g03632 92 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03632 Vivi-Chr6 130251369 130252145 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi6g03632 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03632 - - gmx:100818368 153.295