Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03615 ATGGGATCTCATGGTGGAGCAATCCAAGCGCCAAAGGCAGGACCTTTGGCTAGAGAAGGATCTTTGTACAATCTCACATTTGATGAGGTGCAAAATCAGCTTGGAAATTTAGGGAAACCCTTAGGAAGCATGAATCTAGATGAGTTACTCAAGAGTTTGTGGACATCTGAAGCTGCTCAAGCTTCTGGATTGGATTCTGGTGCTACTGATGCTTACATGCAACAAGGTCAACTAGCTTCTGGGTCGTCTATGAATCCGCCGGCACTTTCCGGCGATCTTAGCAAGAAAACTATTGATGAGGTTTGGAGAGACATGCAACAAAAGAAGAGTAGTAGTCAGGATAGAAGAACAGCTACACTAGGCGAGATGACTTTGGAAGATTTCTTGATGAAAGCTGGTGTGGCTACTACTGAATCTTTTCCAACAGAGGATAGTGCTATTTCAGGAAGGGTTGATTCTCAACAACAACAACAACAACACAATACATCTCAACATGGTCATTGGATGCAGTTTCAAATCCCTCCAGTGCAACAACAGCAACCACAACAACAGCATCAGCATCAGCATCAAAATCATCAGAATAATATGATGCCTGGTTTTGCAAGCTATATGGCTAGTCATGTGGTTCAACAGCCTGTTTTGGATACAGGATACAATGATGCAATGGTGAGTATATCGCCGTCTTCTTTAATGGCCACTTCATCGGATACACAAACTCAAGGTAGGAAAAGGGTTGCCTCTGGTGTTGTGGTTGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCTGCCGCTCGGTCGCGGGCTAGAAAACAGGCTTACACACAAGAACTGGAGATCAAAGTTTCACATTTAGAAGAAGAAAATGAAAGGCTTAAAAGACTACATGAGATGGAGAGAGTGTTGCCAAGTATGCCACCACCAGATCCTAAGCATCAGCTTCGCAGAACTAGCTCAGCTCCCTTTTGA 984 0.437 MGSHGGAIQAPKAGPLAREGSLYNLTFDEVQNQLGNLGKPLGSMNLDELLKSLWTSEAAQASGLDSGATDAYMQQGQLASGSSMNPPALSGDLSKKTIDEVWRDMQQKKSSSQDRRTATLGEMTLEDFLMKAGVATTESFPTEDSAISGRVDSQQQQQQHNTSQHGHWMQFQIPPVQQQQPQQQHQHQHQNHQNNMMPGFASYMASHVVQQPVLDTGYNDAMVSISPSSLMATSSDTQTQGRKRVASGVVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSHLEEENERLKRLHEMERVLPSMPPPDPKHQLRRTSSAPF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03615 327 MobiDBLite consensus disorder prediction 139 166 - -
Vivi6g03615 327 Pfam bZIP transcription factor 257 299 IPR004827 GO:0003700|GO:0006355
Vivi6g03615 327 SUPERFAMILY Leucine zipper domain 257 302 IPR046347 GO:0003700|GO:0006355
Vivi6g03615 327 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 260 275 IPR004827 GO:0003700|GO:0006355
Vivi6g03615 327 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 326 IPR043452 GO:0003700|GO:0045893
Vivi6g03615 327 SMART brlzneu 253 321 IPR004827 GO:0003700|GO:0006355
Vivi6g03615 327 Gene3D - 255 307 - -
Vivi6g03615 327 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 255 299 IPR004827 GO:0003700|GO:0006355
Vivi6g03615 327 Coils Coil 280 300 - -
Vivi6g03615 327 MobiDBLite consensus disorder prediction 304 327 - -
Vivi6g03615 327 MobiDBLite consensus disorder prediction 175 194 - -
Vivi6g03615 327 CDD bZIP_plant_BZIP46 257 303 - -
Vivi6g03615 327 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 255 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03615 Vivi-Chr6 129936491 129939528 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03615 1 327 bZIP Transcription Factor Family AT3G56850 51.632 8.75e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi6g03615 bZIP_1 2.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03615 K14432 - gmx:100783666 380.948