Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03605 ATGGAAGGAGATAAATGTTGTTCAAGCTTATTTCAAAGGTGCAAGCCTTACATAGCTATGATTTCTCTTCAATTTGGTTTTGCTGGTATGAATATAATAACAAAAGTATCACTCAACCGCGGAATGAGTCACTATGTTCTTGTTGTTTATCGACACGCTTTTGCTACAGCAGCTATTGCTCCTTTTGCTATTGTTCTTGAGAGGAAGATAAGGCCAAGGATTACATTTCTTATGTTCATACAAATGTTTGTATTGGGACTCCTCGGGCCTGTGATTGATCAGAATCTATACTATGCTGGGTTGAAATTCACATCTCCAACATACTCATGTGCTATTAGCAATATTCTCCCTGCTATGACTTTTGTAATGGCTGTTATTTTCAGGATGGAGAAATTGGACATGAGAAAATTAAGATGCCAAGTAAAGTTGATTGGAACTATAATCACAGTTGGTGGGGCTATGGTGATGACATTATACAAAGGACAAGTTATCAATATATTGGGTTCTCAATACATGCATCATCCTAGAAATTATGCACCTGAAAACACTACTGATTCTGGTGAAAAAGATTGGGTCAAGGGTTCTATTCTCCTCATAGTAGCTACCTTTGCTTGGTCTTCTTTCTTCATCCTTCAGGCTGTGACATTAAGACAATATTCAGCACAGCTTTCACTCACAGCCATAGTATGTTGTTTGGGAACACTTCAATCAATTGCAGTAACATTTGTTATGGAAACTAAGCCAAATGTTTGGAACATTGGTTGGGACATGAACCTATTAGCCGCCGCATATGCTGGTATAATATCATCCGGTCTTACATATTATGTACAAGGAATTGTGATGCAAAAGAAAGGACCTGTTTTTGTGACTGCTTTTAGTCCTTTGATGATGATCATTGTAGCTATCATGGGCACTTTCATCCTTGCTGAAAAATTATACCTTGGAGGTGTTATTGGAGCTATTTTGATTGTAATAGGACTTTACTCAGTTCTATGGGGCAAAAACAAAGAAAACAAAGAGATAGAAGCAGAGACAATAACAGAAGGAACAAAGTGTTGTGTTGAAAATGGAGTGTTGGAAACAGTGATTGAAGAAGGTGTTGAAATAAATGACATTGAGATGCAAAAGGATGATGAACCTGCTAAAGTTTTAAGGGTGACAATTATTAGTGCTCCAAAAGTTTAA 1185 0.3705 MEGDKCCSSLFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFAIVLERKIRPRITFLMFIQMFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNILPAMTFVMAVIFRMEKLDMRKLRCQVKLIGTIITVGGAMVMTLYKGQVINILGSQYMHHPRNYAPENTTDSGEKDWVKGSILLIVATFAWSSFFILQAVTLRQYSAQLSLTAIVCCLGTLQSIAVTFVMETKPNVWNIGWDMNLLAAAYAGIISSGLTYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGTFILAEKLYLGGVIGAILIVIGLYSVLWGKNKENKEIEAETITEGTKCCVENGVLETVIEEGVEINDIEMQKDDEPAKVLRVTIISAPKV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03605 394 PANTHER WAT1-RELATED PROTEIN 15 342 IPR030184 GO:0016020|GO:0022857
Vivi6g03605 394 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Vivi6g03605 394 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
Vivi6g03605 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Vivi6g03605 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03605 Vivi-Chr6 129669707 129672119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03605 1 392 Nodulin-like Gene Family AT5G07050 59.848 2.80e-171 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03605 - - gmx:100793545 645.195