Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03604 ATGGAAGGAGATAAATGTTGTTCAAGTTCATTTCAAAGATGCAAGCCATACATAGCTATGATTTGTCTACAATTTGGTTTTGCTGGTATGAATATAATAACAAAAGTATCACTCAACCGTGGAATGAGTCACTATGTTCTTGTTGTTTATAGACACGCTTTTGCTACCGCGGCTATTGCGCCTTTTGCTATTGTTCTTGAGAGGAAGATAAGGCCAAGGATTACATTTCTTATGTTCATACAAATGTTCGTCTTGGGACTCCTCGGGCTTGTGATTCAGAATCTATACTATGCTGGGTTGAAATTTACATCTCCAACATACTCATGTGCTATTAGCAATATTCTCCCTGCTATCACATTTGTAATGGCTGTTATTTTTAGGATGGAGAAATTGGACATTAAAAAATTAAGATGCCAAGTAAAGGTGATTGGAACTGTAATTACAGTTGCAGGGGCTATGGTGATGACATTATACAAAGGACAAGTTATTCAAATTTTGAGTGCTCAATACATGCATCATCCTAGAAATTATGTACCTGAAAACAATACTGATTCTGGTGAAAAGGATTGGGTCAAGGGTTCTATTTTCCTCATAATTGCGACGTTTGCTTGGTCTTGTTTCTTCATCCTTCAAGCTGTTACATTAAGGAAATTCTCAGCACCGCTTTCACTGGCAGCCATAGTGTGCTTCTTGGGAACACTTCAATCAATTGCAGTAACATATGTTATGGAGAGTAACCCAAATGTTTGGAACATTGGTTGGGATATAAACCTATTAGCAGCAGCCTATGCTGGTATAATATCATCAGGTCTTACATATTATGTTCAAGGAATTGTGATGCAAAAGAAAGGACCTGTTTTTGTGACTGCTTTTAGTCCTTTGATGATGATCATTGTAGCTATCATGGGCACTTTCATCCTTGCTGAAAAATTATACCTTGGAGGTGTTATTGGAGCAATTTTGATTGTAATAGGACTTTATTCAGTTCTATGGGGCAAAAACAAAGAGATTGAAGCAGAGACAATAAAAGAAGGAACCAAGTGTTGCGTAGAAAAAGGAGTGTTGGAAACAGTGATTGAAGGTGTTGAAATAAATGACATTGAAGTGCAAAAGGACGAACCTACTAAAGTTTTAAGGGTGACAATTGTTAGTGCTCCAAAAGTTTAA 1167 0.3693 MEGDKCCSSSFQRCKPYIAMICLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFAIVLERKIRPRITFLMFIQMFVLGLLGLVIQNLYYAGLKFTSPTYSCAISNILPAITFVMAVIFRMEKLDIKKLRCQVKVIGTVITVAGAMVMTLYKGQVIQILSAQYMHHPRNYVPENNTDSGEKDWVKGSIFLIIATFAWSCFFILQAVTLRKFSAPLSLAAIVCFLGTLQSIAVTYVMESNPNVWNIGWDINLLAAAYAGIISSGLTYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGTFILAEKLYLGGVIGAILIVIGLYSVLWGKNKEIEAETIKEGTKCCVEKGVLETVIEGVEINDIEVQKDEPTKVLRVTIVSAPKV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03604 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
Vivi6g03604 388 Pfam EamA-like transporter family 16 156 IPR000620 GO:0016020
Vivi6g03604 388 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Vivi6g03604 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 335 - -
Vivi6g03604 388 PANTHER WAT1-RELATED PROTEIN 15 337 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03604 Vivi-Chr6 129658529 129660747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03604 1 386 Nodulin-like Gene Family AT5G07050 58.418 1.69e-160 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03604 - - gmx:100793545 602.053