Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03588 ATGGGAAAATCCGAAGAAGAACAACACCTGCCACGTGGCGCCACCTCATCGGATCGACCGCAGAATGCGGAAACCGAGTGTCGGCGGTGTTGTTGTTCTCAGATTCAGAAACTCGTTGGCTTCAGATGCATTCTCGTTTTCCTCTTCTCTCTTGCTTTGTTCCTCTCTGCTTTGTTCTGGTTGCCTCCGTTTCTTCGATTCGCAGATCACAAGAATCTGCACGATGATTCCAAATATAAAGGTCATGATATTGTTGCAAGCTTTATTGTTAATAAGCCGGTCACTGTGCTAGAAGATAACAAATTGCAGCTCGCAAGGGAAATTTTTGAGGAGATAGAAGCTCCCTCTACTACAACAGTGAACATCTTGTCTCTAGACCAGTTATCCCGGCTAAACAAGACAAAAGTGGTATTTGCAGTCGATCCTGATGGTGGTGAATACTCAGAAACGTCTTCTGCCTCCATAAGTTTGATAAGATCATTATTTACATCCCTGGTAATTCACCAATCAGATCTGCAGCTCACTTCATTTGGAGATCCCTCCTTTTTTGAAGTGCTGAAATTCAAAGGAGGAATTACTATAATTCCACAACAGAATGCATTTCCTTTGCAGAGAGTGCAAACAAAATTCAACTTTTCTTTGAATTTTCCCATTTATCAAATACAAAGAAATTTCAATGAGCTGACAAATCAGCTAAAGTCTGGATTACATCTGACATCCTATGAGAACTTGCAAGTCGTCTTATCAAATTCTGAAGGTTCAACAGTAGATGCTCCCACGATTATTCAATCCTCGGTTCTACTTGCGGTTGGGATTCCTCCATCCAAACAGAGGCTAAAGCAATTGGCGCAAACCATCATGGGACCTCATAATCTTGGCTTGAATAACACTGAATTTGGTAGGGTTAAGCAAGTCAGACTCTCAACTATCTTGCAGCACTCCCTTAACGGCAGTGATACTCGCTCCGCGAGATCACCGGCTCCTGCTCCTGTGCCTCATTCCTCACACCATCATCACCACCATCACCATCATCATCACCATCACCACCATCATGATACCCATCTAACTCCTGCAACTTCTCCTATACCTGCACCTGCACATAATCCCTGGGAGGGGGTAGCTCCACCTGAAGTTGCTTCCCCCCCTGCTACAAAAAGTGCACCTACACCTCAGAAAAGTTCTCAAGCTCATCCTCCTGATTGTCCATTTGAGCGTAGAAAAAGATCTAGGCGTAATGCTGGGAGACATACTTATCTAACACCTGCCATTGCCCCTAGCGTTGAACATCATCACCATGTTCCTATTTCATCACCAAAACCACAGGTTGAACCCCCTCCCCCTACCCATACCTCTCATTCGGTACCTGCTTTGAGTCCTTTGCCAAATGTAGCTTTTGCTCATGCTGAGCCTCCACCTACGAGCGGCCCTGCTGCAGAACAACCGAGCACACAGTTTCACGGGCCATCAATATCACCATCTTCTGCAGGTTGTCTTGGAAGTGTTAAGTGGACATCTTTAATATTTGTTGTACTTGTGTTACATGTGTGA 1548 0.4477 MGKSEEEQHLPRGATSSDRPQNAETECRRCCCSQIQKLVGFRCILVFLFSLALFLSALFWLPPFLRFADHKNLHDDSKYKGHDIVASFIVNKPVTVLEDNKLQLAREIFEEIEAPSTTTVNILSLDQLSRLNKTKVVFAVDPDGGEYSETSSASISLIRSLFTSLVIHQSDLQLTSFGDPSFFEVLKFKGGITIIPQQNAFPLQRVQTKFNFSLNFPIYQIQRNFNELTNQLKSGLHLTSYENLQVVLSNSEGSTVDAPTIIQSSVLLAVGIPPSKQRLKQLAQTIMGPHNLGLNNTEFGRVKQVRLSTILQHSLNGSDTRSARSPAPAPVPHSSHHHHHHHHHHHHHHHHDTHLTPATSPIPAPAHNPWEGVAPPEVASPPATKSAPTPQKSSQAHPPDCPFERRKRSRRNAGRHTYLTPAIAPSVEHHHHVPISSPKPQVEPPPPTHTSHSVPALSPLPNVAFAHAEPPPTSGPAAEQPSTQFHGPSISPSSAGCLGSVKWTSLIFVVLVLHV 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03588 515 MobiDBLite consensus disorder prediction 1 21 - -
Vivi6g03588 515 MobiDBLite consensus disorder prediction 333 353 - -
Vivi6g03588 515 PANTHER F20B24.21 1 508 - -
Vivi6g03588 515 MobiDBLite consensus disorder prediction 315 490 - -
Vivi6g03588 515 MobiDBLite consensus disorder prediction 438 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03588 Vivi-Chr6 129264348 129270045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03588 1 511 C3H Transcription Factor Family AT3G10810 43.931 3.54e-89 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03588 - - gmx:100792490 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03588 6 129264348 129270045 Vivi6g03588 6 129264348 129270045 ECH