Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03560 ATGCCACGACGAAGTAGGTTGGTTGTTGTATCAGATTTTGTTCTATCTTTCACGTGGCTATGTTCTGGTGTTCTGGTTCGATTATTCGTCTTCAAAATTCTCGGTTTTTCTAATACTGATGATCATGTTGCTGAGTTTATGAAGCTCTCATTTTCCATAGCCAACATGTTCTTGTTTGCTTTCCTTGCCAAGGTTTCTCGTGGCGGTGCTTACAATCCTCTCGCTGTTTTGGTTGATGCTATCACTGGAGATTTTTGTAACTTCTTTTTCTGTGTTGGTTTCAGAATTCCTGCTCAGGTGGTTGGATATATTGTTGGAGTAAAACTTGTGATTGGTGCTATTCCTGAAGTAGGACATGGACCACGTTTGAATGTTGACATTCTTCAAGGAGCATTGACAGAAGGAATATTAACATTTGTAATTGTAACCACTTCACTTGTGCTTTCCGCAACAAGAATCCACAAAAGTTTCTTCATGAAGACTTGGATTTCCAGCCTATCTAAGTTAACACTTCATATACTTGGCTCTAATCTAACCGGTGGTTGTATGAACCCCGCTTCTGTAATGGCATGGACTTATGCTCGTGGGGATCCTATAACAATGGAACACATCTTTGTATATTGGATTGCCCCTGTAATGGCAACTATTCTGGCAATGTGTACATTCAGATTATTAGTACGACGTTTTAAAACAGGCTCAAAAAGTAAATCAGATTAA 717 0.3919 MPRRSRLVVVSDFVLSFTWLCSGVLVRLFVFKILGFSNTDDHVAEFMKLSFSIANMFLFAFLAKVSRGGAYNPLAVLVDAITGDFCNFFFCVGFRIPAQVVGYIVGVKLVIGAIPEVGHGPRLNVDILQGALTEGILTFVIVTTSLVLSATRIHKSFFMKTWISSLSKLTLHILGSNLTGGCMNPASVMAWTYARGDPITMEHIFVYWIAPVMATILAMCTFRLLVRRFKTGSKSKSD 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03560 238 Gene3D Glycerol uptake facilitator protein. 8 236 IPR023271 -
Vivi6g03560 238 PANTHER AQUAPORIN SIP2-1-RELATED 7 234 IPR044226 GO:0015267
Vivi6g03560 238 SUPERFAMILY Aquaporin-like 9 229 IPR023271 -
Vivi6g03560 238 PRINTS Major intrinsic protein family signature 91 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g03560 238 PRINTS Major intrinsic protein family signature 133 151 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g03560 238 PRINTS Major intrinsic protein family signature 205 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi6g03560 238 PRINTS Major intrinsic protein family signature 165 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03560 Vivi-Chr6 128877982 128878925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03560 8 238 Major Intrinsic Protein MIP AT3G56950 53.419 1.37e-82 245