Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03553 ATGGATTTTGTTACTGATCCAGCAAAAGGAGCTATCTCGAAACTTGTAGAGCTGGGAGTGGAGTCTACCTTAAAGCAATTTAAATATATGATCCAACACAAAAAAATTACAGCCAATTTGAAGGAGAAACTCGAGGAGTTGAAGGCTTGTAAACAAACGTGGCAAGCATGGATGGTTGCAGAAAACTCCAAAGGAAATCAAATTCCACCTAACATTTCAAATTGGCTTTCACGCGTGGAAGCAATTGAAGTTGAGTTACAAAACTTCTATAAAAGTAGCGTTAACAATAACAAGAAATGCTTTGGTGGACAATGTTCAGATTTGGCATTGAATTACTCTCAAGGTAAGCAAGCCACTGTAAAAATAGAAGATATTACAAAATTGATAGAGGAAGGAAGCAAACTTCCATCTTTATCATATCCTAAACCTCCACCAGCACTTAGGTCAACCTTCACAAACAATGATGTTAAGAGTCTAGAGTCCAGAAATCAAATTATGAATAAAGTCATAGAGAAGCTGAAGGATGATCAGTTCAAAATGATTAGCATTTGTGGGATGGCCGGAGTGGGAAAAACCACATTGGTAAAAGAACTCATCAAAATTGTAGAAAATAAATTATTTGATAAAGTTGCAATGGTTATAGTTTCCCAAAACCCTGACTATGAAAAAATACAAAAAGAAATTGCTGATGGTTTAAGATTGGCGTTTAACTCGCATAATAGAAGGGGTGGGGAAATACATGAGAAGTTGGAGGAATTGCACAAGAAGATGGAAAAGGTGCTAATAGTCCTTGATGATGTGTGGCAAGATCTTAACTTTGAGTTAATGGGACTTTCTTCTCAAAGTCATCAGAAGGGTTTAAAAATCTTACTCACATCAAGGGATAAAAAATTGTGTGAAACAATGGGAATCAAAGAGAATGTACAAGTCTCTATATTGCAAACGGATGAAGCTTGGAATCTATTTCAAGAAATGGCAGGAGGTATTGTAAACAAACACGATATCGAACCAATAGCAAGAGAGGTTACAAATGAATGTGGTGGCTTGCCCCTTGCTATTGTAACTGTTGCGAGAGCTCTTCGCAGTGAGGAAAAGATTTCTTGGGAAGATGCACTACAACAATTGAGATACTCCCAATCATTACCCTTCAATAACAACATACAAGAATATTTATATTCACGTATTGAGGTTAGCTTAAAATTTTTGGGTAGTGAAGAACACATGTCTTTCCTTTTTCTATGTGGGTTATTTCCAGAGGACTTTGACATTTCTGTTGAAAATATATTACGTCATGGGATGGGCTTGGGGTTGTTTGAGGAAAATGATGCAGTTTGGAAAATAAGAAATCATGTAAATTGTTTAGTGAACAATCTGAAAAAATGTTTCTTATTGTTAGACAGTGAAAAGCAAGGGTGTGTAAAGATGCATGATGTTGTGCGTGACGTTGTCCTCAAAATTTCTTCCACAAAAGAACATGGGATATGGGTGCAAAGTAATGCCAAATTGAAGCAGGTTAAACAAAAACAAGAAAAATGGCTTAGAATGTCAATTATTTTGGATGCAAAGATTGATTCAGAAGATAACTTAGAATGTCCAACACTAGAACTTATACAGGTGCAAACACAAGGGGAACAATATGATATTATTTCATTACCAGAGAACTTCATCCACGGAATGACTAAACTCAAAGTTGTAAACATTTCAAATTTGTGCATTCCAATACTATCATCTCTTTTTCACGCCTTGATAAACCTTCGCACATTGCAACTTGAAGGATGTCATGTTGGAGATATATCTGTAATTGGTAAGGAGGCCATGAGACTAGAAATCCTAAGCTTTGCCAACTCCAATATCAAAGAGCTTCCATCTGAAATTGGGAATCTGATATATCTCAAATTATTGGATTTGACAGGATGTAATCATCTTAACTTTATTGCTACAAATGTTTTCACAAGGCTAACATGGTTGGAAGAACTTTATTTTAGGATAAACAATTTTCCTTGGTTGCTAAACAAAGCATTTCTCGAAGACTTAAGAAATCTTTCGATACAGTTAAAGGTTCTTGAGATCAAACTAAATAAACTTGATTTCTTACCTGGTGATCTAATTTTTAGAAACCTCAAAAAGTTTTGGGTTTATGTAGTTCCTTCTGCTCCTTATGAAAGCCATGGATATTTGGAGTCAAATATGATACAGTTAAGAGCTTTAGATTACAACTCTGTTAAGAGTAGTATGATGACCATGCAACTCATCAAGAAATGTGAAATTCTCATATTAGAGAAAGTGAAGGACTTGAAAAATGTCATATCAGAATTAGATGACCGTGGTCTCCAATGTGTGAAAGATTTAAGGCTTGATTCCTGCTCCGATCTTGAGTGTGTCATAGATTTCCATGCTCCACAGCCTACCTTACCATTGATCGAATCCCTGTGTCTAAATAATCTTGTTAGTATGAGGACAGTAATTCAGGTACCTGATCATAGTGAAACCAATGAAGCATTGATGGAATTCTCATATTTAGAAAAAATGGAGTTGAAGTATCTTCGAAAGTTGATTGGCTTCAGTAACTCTCAATCAATTCATCATGGACTGAGTTATACCACCAATCATTCAGATTTAGTTGGTCATGGACCATTGTCAGCTAGTGCCAAGCTGTTTTCTTTTGATTGGATGAAACAATTTCCAAAATTGGAAACAATACTGCTACGTGATTGTGTTTCCATTGAGATGGTATTTGACTTGGAAGGTAATCCGGAAGTCATCGAAAATGGTATTTTGTTTCCTCTGCTAAAAGAACTTGATATATCATACATGGATCATTTGCTATATGTTTGGGGGAATGTTCCGTGTAGTGTCGGAGGTTTTCATAATTTAAGAGTTCTAAAAATCTCAAGGTGCAACTCTTTGAAATATGTATTTACTTCTGTCATTGTTAAAGCAATTTCAAATCTTGAGAAGTTAGAAGTAAGAGATTGTGAAATGATGGAGAACATAGTGGTTTGGGGAAGAGATGATAAAGAGGATGACAATATCAAAGAACATGTGATAATGAACGGGTTTGGTAAACTATGTTATTTATCACTTTTAAATCTTCCAAAGCTTGTGAATGTTTATTTAGACTCTGTTGAGTTAGAATGTCCATCCTTGAGGAATTTTGAGATTGTTGGTTGTCCTATGTTAGAGATATCTTTATTACCAACCTATATCCCTGCAAATCAAGACAAAGACACAAATTCATTGAATATAGAAGATAATTCAAGCTCTTCTACTTGGACCCCTATAGAATGTGCGCCATTTCTACCCAAGTTTACTCGTAAAAGAACCACAAATAAGAGAATTAATAAGCAAGAAGCATCAGTAATTCGAGCATTAGAGGATGATATACATTCCCTTTTTGAAATGAATCCCAAGAAAGTAAAATGTCATATGCGTGCTCTTGAAGAACTAAACATTGAGAAATGTGATTTGTTGGATGTAATATTTTTTGACGAAGAAAAATTCAATTTCCTAGTTTTGTCATACCTGAAAACCATCAAAATTGGAAAGTGTGACAAGTTAAAATCCATTATGGCTAAAAGAGAAGAGAGGCGGGACACGATAAAATATTTTACTCAACTAGAGGTTCTTCACTTGGAAGAGCTTCCAAATCTCATGAGATTTTATTTTTCGGGATTATATGAATCCCAAGACAAACAACAACACAAGGTTGGATGTGTGGATGATCACGAAAGGATAAGCAGCCATCCATTCATGGATGAGTCCTTGTTTCCAAACTTAACTTCTTTGCTCATAGATACTTGTAACAAAATTAGCATATTGTTCTCTCATTCATCCTTGAGTAGTCTTGAACAACTTGAGAAGTTAGAAGTACGAAATTGCCAGAACATGCAAGAAATAGTATCTCAAGAAAAGATAGAAGCAACTTCAAATAAGATTGTGTTGGGCAAGTTAAAACATCTCATTTTTTGGAAGCTACCAAACCTTAAGGCCTTTTGCCTAAGTTCCTATAATTTCTTTTTCCCATCATTGCAAGATGTGGAAATTAAAGATTGTCCCAATGTAGATGTTTTATCACAAGGATTTTCAAATACACCAAAGCTTGAGAAGGTCACCATGATGATTGGTTTCATTTACATAGAGTATATGCATAAGAGAGACATCAATTCCACTATACGAGGATTTAAAGCATTTGTGGAATCACAAGGATCAAATATGTTGAATGGGGCCGTGTGGTATTATGGAGGAAACCTCGATATCTCAAATATAAATATAAATATCAACACATTTAATGAGATTGTAAGCTTCCATAAGCTAACATCTATTGGGGTTTCATATTGCCACAATTTAAAGAGTTTGTTCTCCCATTCTATGGCCAAAAGTCTTGGGCAACTTCTTACTCTAATAGTCCAGGATTGTAAAATTATGGAAAAGATAATAACAAAGGAAGATGGAAATATTGAAGGAGGAAACAAGTTCAAGAATTTATTTCCCAATTTGGTGGTGTTAATACTTAGGTGTCTTCCTAATTTGGAATGTGTTTGTTCAATTGACTATGACTATGATCTCCCATGGTGTACCAATGGAGAGGATGAAATCATTAGCAAGATTCAAATTACATTTCCTAAATTAAGCATGTTGATTCTTTCTGAAGTTCCGAAGCTCAAGTGTTTTTGTTCCGGAACATATGACTACAACATCATGGTCTCCTCAATTCAAGAGTGTTGTAATATGGGAATATTTCCCCATGGAAATATTATTGTAAACACACCTAACCTTCATCAAGTTGAAGGCACGTGGACTAATATGCACACATTTGGTGACCTTAATTTGACTATATATTATCTTCTAAATTCAGAGAAATTCAAGGTGGAGTTGGGAAAATTAGAAACATTTAGCAATATTGAGGCAGAGCTTGTTGACTACATCAAAAGAGTATCAAATCTAGGTATTGTAAACAATCACAAGCTATTGAATTTCATCCCATCAAACATGATGCACATAATCTCCCACACGAAGCATATCTACTTTCATGAATGTGAGTTCTTAGAAGAGATATTTGAATTGAATGATGATGGTATGATATACGAGTTAGAGACCATATACTTGTTTTCTCTTCCAAAATTGAGGTACATTTGGAAAAATCTTGGTCAGAGTTTAGCCTTTCAGAGACTTCAATATATTGGTATAGAAAAATGCAATGCTTTGAAATATGTGTTTGTGGATATTTCCATAGCCACAAGCCTTCCACATTTGTTTTCGATTATAGTGTCTGAATGTGATCAGATTGAGGGCATCATTAAGAATAATTCTAATTCTCTCAATTGTTCACAACAACAAAAGAAGGCTGAGAAGATCATATTCCCATCATTGGCCAGAATTGAACTAAGAAAGCTGCCCAGCCTCAAACGTTTTTGTCGAAGCTCTTACCCTTCCTATGTTGAACTTCCAAAATGGGAAAATTTATTCATTCAAAATTGCCCAAAGATGAAAACCTTTTGGCCTGATGGAATATTATACACACCAAGTCTTCAAAACATTTCAGTGGACAATGTCAAATTTTCCGATGTTGCAGATGTGAATGAGGTTATACAAGAATACAATAAATCATAA 5610 0.3496 MDFVTDPAKGAISKLVELGVESTLKQFKYMIQHKKITANLKEKLEELKACKQTWQAWMVAENSKGNQIPPNISNWLSRVEAIEVELQNFYKSSVNNNKKCFGGQCSDLALNYSQGKQATVKIEDITKLIEEGSKLPSLSYPKPPPALRSTFTNNDVKSLESRNQIMNKVIEKLKDDQFKMISICGMAGVGKTTLVKELIKIVENKLFDKVAMVIVSQNPDYEKIQKEIADGLRLAFNSHNRRGGEIHEKLEELHKKMEKVLIVLDDVWQDLNFELMGLSSQSHQKGLKILLTSRDKKLCETMGIKENVQVSILQTDEAWNLFQEMAGGIVNKHDIEPIAREVTNECGGLPLAIVTVARALRSEEKISWEDALQQLRYSQSLPFNNNIQEYLYSRIEVSLKFLGSEEHMSFLFLCGLFPEDFDISVENILRHGMGLGLFEENDAVWKIRNHVNCLVNNLKKCFLLLDSEKQGCVKMHDVVRDVVLKISSTKEHGIWVQSNAKLKQVKQKQEKWLRMSIILDAKIDSEDNLECPTLELIQVQTQGEQYDIISLPENFIHGMTKLKVVNISNLCIPILSSLFHALINLRTLQLEGCHVGDISVIGKEAMRLEILSFANSNIKELPSEIGNLIYLKLLDLTGCNHLNFIATNVFTRLTWLEELYFRINNFPWLLNKAFLEDLRNLSIQLKVLEIKLNKLDFLPGDLIFRNLKKFWVYVVPSAPYESHGYLESNMIQLRALDYNSVKSSMMTMQLIKKCEILILEKVKDLKNVISELDDRGLQCVKDLRLDSCSDLECVIDFHAPQPTLPLIESLCLNNLVSMRTVIQVPDHSETNEALMEFSYLEKMELKYLRKLIGFSNSQSIHHGLSYTTNHSDLVGHGPLSASAKLFSFDWMKQFPKLETILLRDCVSIEMVFDLEGNPEVIENGILFPLLKELDISYMDHLLYVWGNVPCSVGGFHNLRVLKISRCNSLKYVFTSVIVKAISNLEKLEVRDCEMMENIVVWGRDDKEDDNIKEHVIMNGFGKLCYLSLLNLPKLVNVYLDSVELECPSLRNFEIVGCPMLEISLLPTYIPANQDKDTNSLNIEDNSSSSTWTPIECAPFLPKFTRKRTTNKRINKQEASVIRALEDDIHSLFEMNPKKVKCHMRALEELNIEKCDLLDVIFFDEEKFNFLVLSYLKTIKIGKCDKLKSIMAKREERRDTIKYFTQLEVLHLEELPNLMRFYFSGLYESQDKQQHKVGCVDDHERISSHPFMDESLFPNLTSLLIDTCNKISILFSHSSLSSLEQLEKLEVRNCQNMQEIVSQEKIEATSNKIVLGKLKHLIFWKLPNLKAFCLSSYNFFFPSLQDVEIKDCPNVDVLSQGFSNTPKLEKVTMMIGFIYIEYMHKRDINSTIRGFKAFVESQGSNMLNGAVWYYGGNLDISNINININTFNEIVSFHKLTSIGVSYCHNLKSLFSHSMAKSLGQLLTLIVQDCKIMEKIITKEDGNIEGGNKFKNLFPNLVVLILRCLPNLECVCSIDYDYDLPWCTNGEDEIISKIQITFPKLSMLILSEVPKLKCFCSGTYDYNIMVSSIQECCNMGIFPHGNIIVNTPNLHQVEGTWTNMHTFGDLNLTIYYLLNSEKFKVELGKLETFSNIEAELVDYIKRVSNLGIVNNHKLLNFIPSNMMHIISHTKHIYFHECEFLEEIFELNDDGMIYELETIYLFSLPKLRYIWKNLGQSLAFQRLQYIGIEKCNALKYVFVDISIATSLPHLFSIIVSECDQIEGIIKNNSNSLNCSQQQKKAEKIIFPSLARIELRKLPSLKRFCRSSYPSYVELPKWENLFIQNCPKMKTFWPDGILYTPSLQNISVDNVKFSDVADVNEVIQEYNKS 1869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03553 1869 Gene3D - 312 396 IPR042197 -
Vivi6g03553 1869 PRINTS Disease resistance protein signature 180 195 - -
Vivi6g03553 1869 PRINTS Disease resistance protein signature 626 642 - -
Vivi6g03553 1869 PRINTS Disease resistance protein signature 346 360 - -
Vivi6g03553 1869 PRINTS Disease resistance protein signature 254 268 - -
Vivi6g03553 1869 SUPERFAMILY RNI-like 1256 1510 - -
Vivi6g03553 1869 Coils Coil 33 53 - -
Vivi6g03553 1869 Gene3D Ribonuclease Inhibitor 1413 1860 IPR032675 -
Vivi6g03553 1869 Coils Coil 156 176 - -
Vivi6g03553 1869 Pfam NB-ARC domain 163 389 IPR002182 GO:0043531
Vivi6g03553 1869 Gene3D - 147 311 IPR027417 -
Vivi6g03553 1869 FunFam Probable disease resistance protein At1g61300 145 307 - -
Vivi6g03553 1869 Gene3D Ribonuclease Inhibitor 523 867 IPR032675 -
Vivi6g03553 1869 SUPERFAMILY RNI-like 1646 1854 - -
Vivi6g03553 1869 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 412 IPR027417 -
Vivi6g03553 1869 Coils Coil 671 691 - -
Vivi6g03553 1869 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 885 1064 - -
Vivi6g03553 1869 SUPERFAMILY L domain-like 474 1221 - -
Vivi6g03553 1869 Gene3D Ribonuclease Inhibitor 1124 1236 IPR032675 -
Vivi6g03553 1869 Gene3D Ribonuclease Inhibitor 878 1002 IPR032675 -
Vivi6g03553 1869 Gene3D Ribonuclease Inhibitor 1241 1375 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03553 Vivi-Chr6 128750677 128759777 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03553 170 590 WRKY Transcription Factor Family AT5G45050 25.231 1.21e-08 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03553 - - vvo:131623704 3444.83