Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03538 ATGGAAGATAAGATGCAACCTGACCCCCCCAACAACACTCCAAACCAACATGTTTCCGAGAAAAACGAACCGGTTAGGTCAAGGTGGACACCAAAACCAGAACAGATTCTCATACTTGAGTCCATCTTCAACAGTGGCATGGTGAATCCCCCCAAAGAAGAAACTATTAAGATAAGAAAACTCCTTGAGAAATTCGGCAACGTCGGCGACGCCAACGTCTTCTACTGGTTCCAAAACCGGCGGTCTAGATCTCGCCGCCGACAACGCCAGATGCAACAGGCCACACTTGATCAGCAAAAGAATCAGATGGTGATGATGCAATCTCAGCAAGTTGCTAATAATGGTGCAAGTGAAATAACCAACCCAGCCATGGTTTTTGGTGATTCTTCTGGTTCATCATCTTCATCATGTGGTGGTGTTCTTGGTGGTCAACAAGGGATGGATGGTTTGTTTTCAGTTTCTTCTCAGATGGGTTTCTTTGGAGGTGATCAAAGCTTAGCTGCTTCATCAATTTTCAACCCTCCTCTTTCTCCCAATTTGAATTATCACTCTGGATATGGAGGTGCTAGTGCTAGTGCTATTACAGGATTGATAACAGTGTTTATCAATGGAATAGCAACAGAAGTTCAAGCGGGGCCTATAGACATGAAAACAGTATTCGGAGAAGATGTCATGTTAGTTCATTCCTCTGGTGTGCCAGTTCCTACAAATGAACATGGTATTTTGATTCACAACTTGCACCATGGTGAAAGCTACTTTCTGGTATCAAAGTCAACACAAGTATGA 786 0.4351 MEDKMQPDPPNNTPNQHVSEKNEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWFQNRRSRSRRRQRQMQQATLDQQKNQMVMMQSQQVANNGASEITNPAMVFGDSSGSSSSSCGGVLGGQQGMDGLFSVSSQMGFFGGDQSLAASSIFNPPLSPNLNYHSGYGGASASAITGLITVFINGIATEVQAGPIDMKTVFGEDVMLVHSSGVPVPTNEHGILIHNLHHGESYFLVSKSTQV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03538 261 Gene3D - 24 94 - -
Vivi6g03538 261 SUPERFAMILY Homeodomain-like 21 93 IPR009057 -
Vivi6g03538 261 FunFam WUSCHEL-related homeobox 11 26 93 - -
Vivi6g03538 261 SMART HOX_1 24 91 IPR001356 GO:0003677
Vivi6g03538 261 MobiDBLite consensus disorder prediction 1 29 - -
Vivi6g03538 261 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 258 IPR044558 GO:0003700|GO:0048830
Vivi6g03538 261 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
Vivi6g03538 261 Pfam Homeodomain 26 86 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03538 Vivi-Chr6 128287922 128290243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03538 19 261 Wox Gene Family AT3G03660 51.737 5.66e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vivi6g03538 Homeodomain 8.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03538 - - lang:109335690 276.944