Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03537 ATGGAAGATAAGATGCAACCTGACCCCCCCAACAACACTCCAAACCAACATGTTTCCGAGAAAAACGAACCGGTTAGGTCAAGGTGGACACCAAAACCAGAACAGATTCTCATACTTGAGTCCATCTTCAACAGTGGCATGGTGAATCCCCCCAAAGAAGAAACTATTAAGATAAGAAAACTCCTTGAGAAATTCGGCAACGTCGGCGACGCCAACGTCTTCTACTGGTTCCAAAACCGGCGGTCTAGATCTCGCCGCCGACAACGCCAGATGCAACAGGCCACACTTGATCAGCAAAAGAATCAGATGGTGATGATGCAATCTCAGCAAGTTGCTAATAATGGTGCAAGTGAAATAACCAACCCAGCCATGGTTTTTGGTGATTCTTCTGGTTCATCATCTTCATCATGTGGTGGTGTTCTTGGTGGTCAACAAGGGATGGATGGTTTGTTTTCAGTTTCTTCTCAGATGGGTTTCTTTGGAGGATATGGAGGTGCTAGTGCTAGTGCTATTACAGGATTGATAACAGTGTTTATCAATGGAATAGCAACAGAAGTTCAAGCGGGGCCTATAGACATGAAAACAGTATTCGGAGAAGATGTCATGTTAGTTCATTCCTCTGGTGTGCCAGTTCCTACAAATGAACATGGTATTTTGATTCACAACTTGCACCATGGTGAAAGCTACTTTCTGGTATCAAAGTCAACACAAGTATGA 717 0.4393 MEDKMQPDPPNNTPNQHVSEKNEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWFQNRRSRSRRRQRQMQQATLDQQKNQMVMMQSQQVANNGASEITNPAMVFGDSSGSSSSSCGGVLGGQQGMDGLFSVSSQMGFFGGYGGASASAITGLITVFINGIATEVQAGPIDMKTVFGEDVMLVHSSGVPVPTNEHGILIHNLHHGESYFLVSKSTQV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03537 238 Gene3D - 26 94 - -
Vivi6g03537 238 Pfam Homeodomain 26 86 IPR001356 GO:0003677
Vivi6g03537 238 FunFam WUSCHEL-related homeobox 11 26 93 - -
Vivi6g03537 238 SMART HOX_1 24 91 IPR001356 GO:0003677
Vivi6g03537 238 MobiDBLite consensus disorder prediction 1 29 - -
Vivi6g03537 238 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
Vivi6g03537 238 SUPERFAMILY Homeodomain-like 21 93 IPR009057 -
Vivi6g03537 238 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 235 IPR044558 GO:0003700|GO:0048830
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03537 Vivi-Chr6 128287890 128290248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03537 19 238 Wox Gene Family AT3G03660 52.419 9.38e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vivi6g03537 Homeodomain 7.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03537 - - lang:109335690 243.432