Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03534 ATGAAGCTCATATCAATCATCCTCTTTTTCTTTGTACTTCCCTTGGCATTTGCTGATCTGCAATTAGGATTCTATGCCTCTTCTTGCCGAAAAGCCGAGTCGATTGTGCAACAAGTTGTGCAAAAGCGATTTAGTCGTGACAAAACGATAACCGCCGCCTTGCTTCGCTTGCATTTTCATGATTGTTTTGTCAGAGGTTGTGATGCATCCCTCCTTATAGACTCAACCAAGAACACCACATCAGAGAAAAACACCGGCGCAAACGCAAGCGTTAGAGGCTACGATCTAATCGACGATGTAAAGGAAGCAATCGAAGCTACATGTCCTTCAACAGTTTCATGTGCAGACATCATAGCCCTAGCAACAAGAGACACTGTGGCCTTATCAGGAGGACCGAAATACAACGTCCCCACCGGAAGACGCGACGGATTAGTCTCCAACGGCAACGATGTTAATTTACCAGGACCAGGCATTCCTATACCAGCACTAACACAATTTTTTGCTGCAAAAGGAATCACGGTCGAAGAAATGGTGACGCTTTTGGGAGCACATACCGTCGGTGTAGCTCACTGCAATTTTTTCTCTAGTAGGTTATCTAGTAATAGAGAGCAACCTGATCCTACAATGGATCCTGCATTGGATGCTAAGCTTGTGAAGCTGTGCAAGTCAAGTAATGGTGCTGCATTTTTGGATCAGAATACTTCTTTTGTTGTTGATAATGAATTTTACAAGCAGATTCTTGTTAAGAGAGGTGTAATGCAGATTGATCAGCAACTTGCTTTGGATAAATCTACAAGTACTTTTGTGTCTAATTTTGCTTCAAATGGTGATAAGTTTGGTAAGAGTTTTGCAAGTGCTATGATAAAGATGGGAAAAGTTGGGGTTTTGGTTGGAAATCAAGGCGAAATTCGCCAGAATTGTAGGGTCTTCAATAAACGTAATTAG 945 0.4212 MKLISIILFFFVLPLAFADLQLGFYASSCRKAESIVQQVVQKRFSRDKTITAALLRLHFHDCFVRGCDASLLIDSTKNTTSEKNTGANASVRGYDLIDDVKEAIEATCPSTVSCADIIALATRDTVALSGGPKYNVPTGRRDGLVSNGNDVNLPGPGIPIPALTQFFAAKGITVEEMVTLLGAHTVGVAHCNFFSSRLSSNREQPDPTMDPALDAKLVKLCKSSNGAAFLDQNTSFVVDNEFYKQILVKRGVMQIDQQLALDKSTSTFVSNFASNGDKFGKSFASAMIKMGKVGVLVGNQGEIRQNCRVFNKRN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03534 314 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Vivi6g03534 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 176 186 IPR019793 -
Vivi6g03534 314 SUPERFAMILY Heme-dependent peroxidases 19 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 CDD secretory_peroxidase 20 310 IPR033905 GO:0004601|GO:0042744
Vivi6g03534 314 Gene3D - 23 311 - -
Vivi6g03534 314 Gene3D Peroxidase, domain 2 154 290 - -
Vivi6g03534 314 Pfam Peroxidase 36 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 ProSiteProfiles Plant heme peroxidase family profile. 19 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Plant peroxidase signature 175 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Plant peroxidase signature 229 244 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Plant peroxidase signature 245 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 FunFam Peroxidase 23 156 - -
Vivi6g03534 314 PANTHER - 6 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g03534 314 FunFam Peroxidase 154 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03534 Vivi-Chr6 128175136 128176536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03534 8 311 Peroxidase AT4G26010 59.150 2.80e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03534 K00430 - gmx:100777946 445.277