Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03520 ATGTACAATAAAAATCATGGTCTAGACAAGGGAAAGGAAAAAGTAAATAAAGAATCGGTAACCAATCTGAAGACGATGGAGAGTCAGCAGAACAAGAAGAAACAAAAGGGGATGGCGGAAGAAGAATCTAATGTCCAATCTAAGAAGAATTTTTGTGAAGAAATTTTTCCATTTCTTCTTTTTGGATTCATTATTGATCCAACTAAAGGAAATCAGAAAGCTTACTCATGCAACTTTTATAGCAGAAAGTTTATTACTCCACAAGCAAAAGGTGGACACCAAAATTGCCACAAATCTGAGAGAAAACTCAAGAAAAATAATGAAACAATGAAAAAAGCTTGGGAACTTTTCTCTAATGGTAATCATGTGAGATGTCAATATCAATATTATGAATTTGACATAATGAATCAGAAAGCTATAGGGTCATCAAGTTTTAATGCACAAGATTTGCATTGTACTACATTGGAGCATATTCCACATATTGATCAAGACAATGTGAGTCGACAAGTTACTATGACTGAGAATGACTTTGATTTGGTTTCAGAGGGAGGTGTTGATAGTAATGTTGACCATGAACACAAAGTGACTCATAAGGAGGAAACATCCAAAGATACTGATTTGAATCTTAAGCTTTAA 636 0.3365 MYNKNHGLDKGKEKVNKESVTNLKTMESQQNKKKQKGMAEEESNVQSKKNFCEEIFPFLLFGFIIDPTKGNQKAYSCNFYSRKFITPQAKGGHQNCHKSERKLKKNNETMKKAWELFSNGNHVRCQYQYYEFDIMNQKAIGSSSFNAQDLHCTTLEHIPHIDQDNVSRQVTMTENDFDLVSEGGVDSNVDHEHKVTHKEETSKDTDLNLKL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03520 211 PANTHER ZINC FINGER PROTEIN JAGGED 19 179 IPR045320 GO:0003700
Vivi6g03520 211 MobiDBLite consensus disorder prediction 1 20 - -
Vivi6g03520 211 MobiDBLite consensus disorder prediction 29 43 - -
Vivi6g03520 211 MobiDBLite consensus disorder prediction 182 211 - -
Vivi6g03520 211 MobiDBLite consensus disorder prediction 1 43 - -
Vivi6g03520 211 MobiDBLite consensus disorder prediction 185 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03520 Vivi-Chr6 128090524 128091159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03520 68 117 C2H2 Transcription Factor Family AT5G25160 46.000 3.92e-08 50.1