Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi6g03518 | ATGTGCAGCACTAATCATGAGACAAACAAGGGGAAGGAAAAAATGAACGAAGACTCAACAGCCAAACAGAATAATGCGAAGAAGCGAAAGGTGATTGTGTTGGAAGAAAAAACTGATGCTGAATCCAAGAGTTCAAAGTGTCACAAGAATGATAATGGTGAAGAAGAATCAACAAATTCACCCAAAGAAGCTTCTCCGTTTGTTCTTTTTGGGTTCATTATTGATCCAACGAAAGAAAGTCGAAAAGCTTACTCATGCAACTTTTGTAACCAAAAGTTTGTTTCTCCACAAGCATTAGGTGGACACCAAAATTGTCACAAAGTGGAGAGAAGACTCCAGAAAAAGAACGAAACTATGAACAAAGCTTTGGAATTTTTCTCTAATGTGGGGTGTGGATATCAATATTGTGGAATTGACAGAGATATTTTGCATGCTGCAGGATCATCATCAAGTTTTGATGCATGGAATTTGCACCATTTGCAGCATAAAGATCAACAATCTAGAATGACTGAAATTGACTTTGGTTTGTTTTCAGAGGGAGGTGCCAATAGTGATGCTGATCATGAACACAAAGAGACTCAGGAGGAGGATGAAGCATCCAAAAATATTGATTCGAACCTTAAGCTTTGA | 630 | 0.3794 | MCSTNHETNKGKEKMNEDSTAKQNNAKKRKVIVLEEKTDAESKSSKCHKNDNGEEESTNSPKEASPFVLFGFIIDPTKESRKAYSCNFCNQKFVSPQALGGHQNCHKVERRLQKKNETMNKALEFFSNVGCGYQYCGIDRDILHAAGSSSSFDAWNLHHLQHKDQQSRMTEIDFGLFSEGGANSDADHEHKETQEEDEASKNIDSNLKL | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi6g03518 | 209 | Gene3D | Classic Zinc Finger | 60 | 128 | - | - | |
Vivi6g03518 | 209 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 84 | 111 | IPR013087 | - | |
Vivi6g03518 | 209 | MobiDBLite | consensus disorder prediction | 7 | 58 | - | - | |
Vivi6g03518 | 209 | SUPERFAMILY | beta-beta-alpha zinc fingers | 81 | 112 | IPR036236 | - | |
Vivi6g03518 | 209 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 86 | 106 | IPR013087 | - | |
Vivi6g03518 | 209 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 5 | 130 | IPR044246 | GO:0009788 | |
Vivi6g03518 | 209 | MobiDBLite | consensus disorder prediction | 180 | 209 | - | - | |
Vivi6g03518 | 209 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Vivi6g03518 | 209 | MobiDBLite | consensus disorder prediction | 183 | 209 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi6g03518 | Vivi-Chr6 | 128080762 | 128081485 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi6g03518 | 79 | 122 | C2H2 Transcription Factor Family | AT5G57520 | 52.273 | 1.61e-10 | 55.8 |