Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03518 ATGTGCAGCACTAATCATGAGACAAACAAGGGGAAGGAAAAAATGAACGAAGACTCAACAGCCAAACAGAATAATGCGAAGAAGCGAAAGGTGATTGTGTTGGAAGAAAAAACTGATGCTGAATCCAAGAGTTCAAAGTGTCACAAGAATGATAATGGTGAAGAAGAATCAACAAATTCACCCAAAGAAGCTTCTCCGTTTGTTCTTTTTGGGTTCATTATTGATCCAACGAAAGAAAGTCGAAAAGCTTACTCATGCAACTTTTGTAACCAAAAGTTTGTTTCTCCACAAGCATTAGGTGGACACCAAAATTGTCACAAAGTGGAGAGAAGACTCCAGAAAAAGAACGAAACTATGAACAAAGCTTTGGAATTTTTCTCTAATGTGGGGTGTGGATATCAATATTGTGGAATTGACAGAGATATTTTGCATGCTGCAGGATCATCATCAAGTTTTGATGCATGGAATTTGCACCATTTGCAGCATAAAGATCAACAATCTAGAATGACTGAAATTGACTTTGGTTTGTTTTCAGAGGGAGGTGCCAATAGTGATGCTGATCATGAACACAAAGAGACTCAGGAGGAGGATGAAGCATCCAAAAATATTGATTCGAACCTTAAGCTTTGA 630 0.3794 MCSTNHETNKGKEKMNEDSTAKQNNAKKRKVIVLEEKTDAESKSSKCHKNDNGEEESTNSPKEASPFVLFGFIIDPTKESRKAYSCNFCNQKFVSPQALGGHQNCHKVERRLQKKNETMNKALEFFSNVGCGYQYCGIDRDILHAAGSSSSFDAWNLHHLQHKDQQSRMTEIDFGLFSEGGANSDADHEHKETQEEDEASKNIDSNLKL 209
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03518 209 Gene3D Classic Zinc Finger 60 128 - -
Vivi6g03518 209 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Vivi6g03518 209 MobiDBLite consensus disorder prediction 7 58 - -
Vivi6g03518 209 SUPERFAMILY beta-beta-alpha zinc fingers 81 112 IPR036236 -
Vivi6g03518 209 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Vivi6g03518 209 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 5 130 IPR044246 GO:0009788
Vivi6g03518 209 MobiDBLite consensus disorder prediction 180 209 - -
Vivi6g03518 209 MobiDBLite consensus disorder prediction 1 62 - -
Vivi6g03518 209 MobiDBLite consensus disorder prediction 183 209 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi6g03518 Vivi-Chr6 128080762 128081485 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03518 79 122 C2H2 Transcription Factor Family AT5G57520 52.273 1.61e-10 55.8