Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03495 ATGGCTTCTGTGTTTCTTGTGTTGGTAACTTTTTTACTCTCTATAAACTACTCACAGCAACTTCAATCATCAAACTTTCAAACCCTTTTGAGAATTCAACAGCTTTTGAACTTTCCTTCTTTAAGAAGTTGGAAAAACTCCACAGATTTTTGCAACAGTGATTCAAACTCTTCACTCACTGTTGTATGCTATGAAGATACCATAACTCAGCTTCACATAATAGGCGAAGGAAAAACTGAAACTCTGTCGAAAAATTTCTCAGTTGATTCATTTGTTACAACACTGGTGAAGCTTCAAGGTTTGAAAGTCCTCACATTGGTTTCTCTTGGTATATGGGGTCCGTTACCGGGTAAAATCGCCCGTCTTTCTTCGTTGGAAATAGTTAATGTGAGTTCGAATCATTTCTATGGTTCGATCCCTGTCGAAATTTCATCGCTTTCGAATCTTCAAACACTCATTCTTGACAACAATATGTTTTCTGGTGTGCTTCCTATTTGGATTGATTTGCTTTCAGGCTTAACTGTATTGAGTTTGAAGAACAATTTGTTCAATGGAACTTTGCCGAATTCGGTTAGTAACTTGGATAATTTGAGAATTCTTTCACTTTCTCATAATAAATTTTATGGTGTAGTACCTGATTTGAGTCACTTGAGAAATCTTCAAGTACTTGAATTGGATGATAATGCTTTTGGACCTCAATTTCCTAAGCTTGGTCACAAATTGGTTACTATAGTGCTAAGAGATAACATGTTCAGGTCTGGTATTCCTGCTGATGTGAGCTCGTATTATCAGCTCAAGCGATTTGATATCTCGTCGAATACATTTATCGGGCCATTCCAAACAGCGTTGTTGTCACTTCCTTCTATTGCTTACATCAACATCTCTCAGAACAAATTAACCGGAATGCTTTTCGAGAATGTTTCTTGCAACTCTGAGCTTGAAGTTGTTGATTTATCGTCGAATCTCTTGACTGGGAGCTTACCAAAATGTCTAGCTTCAAATTCCAGTGATAGGACTGTTTCGTATGCTAGAAATTGTCTCGAGACAACAAATCAAAATCAACAGCCACCGCCTTTTTGCCACACCGAAGCCTTAGCCGTGGGAGTATTACCTGAAAGAAAGAAGCACAAGCAAGTATCAAAGGTAGTTCTTACCCTTGGTATAGTAGGTGGAACTCTTGGAGGAGTAGCAGTTTTTTTGCTGATTTTGTTTATTGTTAGAAGAGGAAATTCTAGAAGCAAAACGAAGAATCCTCCAAGATTAATATCGGAGAATGCAGCTTCCGGATACACCTCTAAGTTGCTTTCTGATGCAAGATATATATCTCAAACAAAGAAATTCGGAGCGCTTGGCCTGCCTAACTATAAGAGTTTTTCATTGGAAGAGATCGAGGCAGCTACAAACAACTTCGATACAGCTTCTTTCATGGGTGAAGATTCTTATGGAGAGATGTACAAAGGTCAGCTGAAGAACGGATCATATGCTGTAATTAGATGTATCAAAATGAAAAAAAGATACAGCACTCAGAACTTCATGCAGCACATGGAACTTATCTCAAAACTTAGGCATCGTCATTTGGTTAGCGCCCTCGGACACTGCTTCGAATGTTCTTTAGAAGATTCAAGTGTCAGCAGAATATTTCTTGTCTTTGAATATGTTCCAACTGGCACACTCAGGAGCTGGACTTCTGATGGGCACACTGGAAAGTCGCTGAATTGGACCCAACGCATAGGAGCGGCAATTGGAGTAGCAAAGGGAATTCAATTTTTGCATACAGGAATTGTCCCTGGTGTATATTCAAACAATCTCAAAATTGAGGATGTTTTATTGGATCACAATCTTGTGGCAAAAATTTGCAGTTATAATTTGCCTTTGTTATCTAACATAGGAAAGGTTCGACGTGGAAATTCTTCCAATGGATTCAAACAATCTAGTATCAATAAAAGTGGAAAGCATGAAGATAAGTGTGATATATATGACTTTGGAGTAATACTACTGGAAATCATTCTAGGAAGGACAATAAAGACAACAAATGATGCAGAAGCTTTTAAGGAACTGTTGCAAGCAAGCTTAGGAGCAGATGAGGACGGTCGAAGGAGCATTGTCGATCCAGCAATTCGCAAGGCATGCTTGGAACAGTCGTTGAAGACAATGATGGAGATATGTGTGAGGTGTCTTATTAAAGAACCTGCAGAAAGACCCTCCATAGAAGATGTTTTGTGGAATTTGCAGTTTGCTGCTCAAGTACAGGATGCTTGGAGAGGTGATTCTCAAAGTAGTGAGGGGTCACCAGGTTCTCCTCAAAGAACGGCCTTCCGTTAG 2322 0.3915 MASVFLVLVTFLLSINYSQQLQSSNFQTLLRIQQLLNFPSLRSWKNSTDFCNSDSNSSLTVVCYEDTITQLHIIGEGKTETLSKNFSVDSFVTTLVKLQGLKVLTLVSLGIWGPLPGKIARLSSLEIVNVSSNHFYGSIPVEISSLSNLQTLILDNNMFSGVLPIWIDLLSGLTVLSLKNNLFNGTLPNSVSNLDNLRILSLSHNKFYGVVPDLSHLRNLQVLELDDNAFGPQFPKLGHKLVTIVLRDNMFRSGIPADVSSYYQLKRFDISSNTFIGPFQTALLSLPSIAYINISQNKLTGMLFENVSCNSELEVVDLSSNLLTGSLPKCLASNSSDRTVSYARNCLETTNQNQQPPPFCHTEALAVGVLPERKKHKQVSKVVLTLGIVGGTLGGVAVFLLILFIVRRGNSRSKTKNPPRLISENAASGYTSKLLSDARYISQTKKFGALGLPNYKSFSLEEIEAATNNFDTASFMGEDSYGEMYKGQLKNGSYAVIRCIKMKKRYSTQNFMQHMELISKLRHRHLVSALGHCFECSLEDSSVSRIFLVFEYVPTGTLRSWTSDGHTGKSLNWTQRIGAAIGVAKGIQFLHTGIVPGVYSNNLKIEDVLLDHNLVAKICSYNLPLLSNIGKVRRGNSSNGFKQSSINKSGKHEDKCDIYDFGVILLEIILGRTIKTTNDAEAFKELLQASLGADEDGRRSIVDPAIRKACLEQSLKTMMEICVRCLIKEPAERPSIEDVLWNLQFAAQVQDAWRGDSQSSEGSPGSPQRTAFR 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03495 773 ProSiteProfiles Protein kinase domain profile. 470 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03495 773 Gene3D Ribonuclease Inhibitor 22 237 IPR032675 -
Vivi6g03495 773 ProSiteProfiles Leucine-rich repeat profile. 196 218 IPR001611 GO:0005515
Vivi6g03495 773 SUPERFAMILY L domain-like 95 348 - -
Vivi6g03495 773 Gene3D Ribonuclease Inhibitor 238 360 IPR032675 -
Vivi6g03495 773 Gene3D Transferase(Phosphotransferase) domain 1 553 760 - -
Vivi6g03495 773 PANTHER UNNAMED PRODUCT 82 675 - -
Vivi6g03495 773 MobiDBLite consensus disorder prediction 754 773 - -
Vivi6g03495 773 Gene3D Phosphorylase Kinase; domain 1 433 552 - -
Vivi6g03495 773 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 553 759 - -
Vivi6g03495 773 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 443 552 - -
Vivi6g03495 773 Pfam Protein tyrosine and serine/threonine kinase 475 740 IPR001245 GO:0004672|GO:0006468
Vivi6g03495 773 SUPERFAMILY Protein kinase-like (PK-like) 453 745 IPR011009 -
Vivi6g03495 773 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase isoform A 239 356 - -
Vivi6g03495 773 Pfam Leucine rich repeat 147 207 IPR001611 GO:0005515
Vivi6g03495 773 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 22 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03495 Vivi-Chr6 127634042 127638183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03495 41 764 Miscellaneous Gene Families AT3G03770 62.877 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Vivi6g03495 PK_Tyr_Ser-Thr 3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03495 - - gmx:100786077 1216.83