Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03490 ATGGCGGAAATAGTGGAAGAAAAAATACCGTTTCTAACAACAAATCAATCGAAGGTGCTAACTCCGTTGTACAAAGATTTTGAACTGATATGCGCAGAAGGTCCAAGGTTCGGCAATATGTTCAAGTGCACCTGTCGTTTAACCAAAGAGGTAGTAGCTATCAAGATTTTGAACATTCCGGAAAAAGAGAAAATCTATGGGGTTCCACACAGAATCTTGAATCACGTCTCTATCCTCAAAATGTTAATCCATCCCAATATAGTCAGTTTGCTGGAAGTGATGGAAACTGAGGATGATGTGTTTCTTGTTTTTGAGCATTTTGACCTTAGTCTCAAAAGATACATTGCGGCCAATTTCCTCCTTTTCGACATTCGAGGCCAGGAAAAAAGTTTTCTACGTCAAGCTCTTTCTGGATTGGCATACTGTCATTCTCACAAAATTCTACACAGAGATCTCAAACCGAATAATATTCTAGTTTCATTCACAAATTTTCTAGATGTTAATCAAGTCAAGCTATGTGACTTTGGTGTGGCAAAAACCATTGAACCTCCTTTTTCACCCTACTCTAACAAGATGGGGAATCCTTGTTATAAAGCACCTGAACTTTTGATGGGTTCTACCCGCTACTCAACTGCAATCGATATCTGGTCAATGGGCTGCATATTTGCGGAGATGATTAAGCTCAAACCTTTGTTCGTTGGTAAAGACGAACCTGAGATATTGTCTGAGATATTTTGTTTGCTTGGCGCGCCAACAGAAGAAAACTGGCCTGGTGTGTCTTCTATATGCTCCTTTATTAAATATCTTGATCCTTCAATGAAGCCAAAGGACCTAGCATTAGTGTTCCCAAGGTTCGATCCTGTTGGTCTTGATCTTCTTTCGAAAATGCTTTGTCTGTGCCCAAATGCGAGGATTTCAGCTGAGGAAGCTCTTCACCATCCATATCTTCAATTTTGA 957 0.3992 MAEIVEEKIPFLTTNQSKVLTPLYKDFELICAEGPRFGNMFKCTCRLTKEVVAIKILNIPEKEKIYGVPHRILNHVSILKMLIHPNIVSLLEVMETEDDVFLVFEHFDLSLKRYIAANFLLFDIRGQEKSFLRQALSGLAYCHSHKILHRDLKPNNILVSFTNFLDVNQVKLCDFGVAKTIEPPFSPYSNKMGNPCYKAPELLMGSTRYSTAIDIWSMGCIFAEMIKLKPLFVGKDEPEILSEIFCLLGAPTEENWPGVSSICSFIKYLDPSMKPKDLALVFPRFDPVGLDLLSKMLCLCPNARISAEEALHHPYLQF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03490 318 SMART serkin_6 24 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03490 318 ProSiteProfiles Protein kinase domain profile. 26 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03490 318 Pfam Protein kinase domain 37 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g03490 318 SUPERFAMILY Protein kinase-like (PK-like) 37 317 IPR011009 -
Vivi6g03490 318 Gene3D Transferase(Phosphotransferase) domain 1 126 318 - -
Vivi6g03490 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Vivi6g03490 318 PANTHER CELL DIVISION PROTEIN KINASE 36 316 - -
Vivi6g03490 318 Gene3D Phosphorylase Kinase; domain 1 24 108 - -
Vivi6g03490 318 FunFam Mitogen-activated protein kinase 126 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03490 Vivi-Chr6 127607529 127609316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03490 37 317 Core Cell Cycle Gene Families AT3G48750 41.993 1.68e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Vivi6g03490 Pkinase 6.9e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03490 K02206 - psat:127128144 330.487