Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03462 ATGGTGGTGTGTATCCAATCTCAATCCATTGTCATCCCTTCCAAACCCACCCCTAGTACAAAACTCTTTTCATTATGTGAACAAATCAAGCTTCGCACTCATGCTCCTCTCCTCTACGTTTACAATCCTCATAAAAACATATCAACCTTCCTTGAAACACTTAGAAAATCTCTTAGCCAAGTTTTGGTTATTTACTATCCAATAGCTGGGAGGTTAAGTTGGATCAAAGATGGAAGATGGGAACTTAATTGCAACGCCAAAGGAGCAATTCTATTAGAAGCTAAATGTGAAGCTAACTTGAAAGATTTGGGTGATTTTGTGCCGAATAATTTGGTGTCACAACTTATACCAAACATTAATTATGATGTTCCAATTGAGGATATTCCGTTATTGGTGGTGCAACTTACGAGATTCCGTTGTGGCGGTTTTACGTTAGGCGTTGCTTTCTGTCGAGGTGCAGCCGATGGAACGGCTGCCATGCGTTTCATGAGCGCATGGGCTAAGTTGGCGCGTGGGGAGAATTTGGACTCTAATGACTTTCCATGTCACGATCGAACTTTGTTAATATTGCATTTGCATTCTGAGTTTGAAGCGCCTCCTAAATGGATAGGTCAAGATTTGGGAGACGACACAGAAACAAGTGTTGTTATTATGAAACTCACGCGAGAACAAGTTTTAAAACTAAAGAAAAACGTTAGTTCTCGCGGGAGTTTACAATCCACCTCTAAAGATGTTCATAAGACAAAACCTTTTACATCTTTCGAGGTTATTGCAGGACATATTTGGAGGTGTGTTAGTAAAGCACGCTACACGCGTGGAAATAGTGACCAACCCACAAGGTTGTCCACTTTGATTAATTGTAGAAATCGTTTAAAACCACCTCTTCCTAGTAGTTATGTCGGAAATACAGCATTTCCAACCGTGACACCAACTCGCTCGTTTAATGATCTTATTCGCAAGCCTTTACGTAATGCAGTTGAGGATGTTCGAGCCGCGCTTGAGAGGGTGACAGGGGAGCATGTAATGTCAGCACTTGATTACATAGATAGGGAGAAGGACATGGAATTATTAAGATATAACTTTCACTACCCTGCAAAGAGTGTGTGTGAGGAGGGACAAAACAAAGGGAACCCAAATCTATTTGTTGTAAGTTGGATGAATTTTTCATATAAAGAAACAGATTTTGGATTGGGAGAGCCTTTTTATTTTGGGCCAGGGTACATGGATTCTGAAGGGAAAGCATTTGTTATGAATAATAATGGTGATGGTGATGGTATTGTGGTGGCAATTTCTTTGGAGGCATCTTTCATGGATGTGTTCAAGAAAATATTTTATGAGGATATCGAAGAGGTGTTTTGTAGTTCTAAATTGTGA 1374 0.401 MVVCIQSQSIVIPSKPTPSTKLFSLCEQIKLRTHAPLLYVYNPHKNISTFLETLRKSLSQVLVIYYPIAGRLSWIKDGRWELNCNAKGAILLEAKCEANLKDLGDFVPNNLVSQLIPNINYDVPIEDIPLLVVQLTRFRCGGFTLGVAFCRGAADGTAAMRFMSAWAKLARGENLDSNDFPCHDRTLLILHLHSEFEAPPKWIGQDLGDDTETSVVIMKLTREQVLKLKKNVSSRGSLQSTSKDVHKTKPFTSFEVIAGHIWRCVSKARYTRGNSDQPTRLSTLINCRNRLKPPLPSSYVGNTAFPTVTPTRSFNDLIRKPLRNAVEDVRAALERVTGEHVMSALDYIDREKDMELLRYNFHYPAKSVCEEGQNKGNPNLFVVSWMNFSYKETDFGLGEPFYFGPGYMDSEGKAFVMNNNGDGDGIVVAISLEASFMDVFKKIFYEDIEEVFCSSKL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03462 457 Pfam Transferase family 3 446 - -
Vivi6g03462 457 Gene3D - 1 198 IPR023213 -
Vivi6g03462 457 Gene3D - 207 447 IPR023213 -
Vivi6g03462 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03462 Vivi-Chr6 127115855 127117502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03462 1 446 Monolignol Biosynthesis Gene Families AT5G48930 35.000 3.46e-82 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03462 K13065 - gmx:100775549 573.163