Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03460 ATGAGTTCCTCAAATGCTAGCTATTCCATTATCATACACCCCGACGGTACATCCCACGTTTGTTTCAATAAGATTAAATCACACAGTTCATCTCTTTGGATTGACAATGCTTTAGAACAAACACTGCCTGCATTTGTTCTTCAATTTGCTCTTACAATTGCTCTCAACCGTGCTCTCCTCTTCCTCGCCGAATCATGCAATGTACCTCGCATTGTTCCCAACATTTTTACTGGTTTTTTATTAGGTTCATCAGCTTTAGGAAAATGGGAATATTTCTTCAGCAACGTATTCCCTTTCAACAATATGTATCCATTAGAGACAGTGGGAGCATTGACACTTGTTTACTACGCGTTCTTGCTTGGCTTAGAACTCGACTTGAAACCGATCACAAGGTTTTACTATAATAAGAAAGCGATTATTGTTGCTCTTGCTGGCTTAGTTTTCTCTTTGCCGATTGGTATTGGTTTATACTACCTTCTTATAACGGATATGGGCCGCAAACCGTTGTCGCGTTTAGATAATGATAAACATATGAGAGGTGCAATATTTTGGGGGCTGACACTTTCTTGTAGTAGTGAGTTTCCTGAGGTTGCTAAAATCCTTTCGGATTTGAAGCTTTTGCTGACAGAGAATGGACAGTTGGCGTTAACTTCTTCGTTGATTAATGATTTGTTCTCTTGGACACTGCTTTTGTTGGTTCTGACGCAATTATACTATGCTTCGTTGTTTTCGCTATTTGTCATCCTCGTACTTGTGTTGGCGTGTTTTTATGCGCTTCATCCTCTAGCTAAGTGGCTTGTTAAGAAATTTGGGAATGGTGATCGCGAGTTTGTTGAGACGGAAGTTGTGTTTCTTCTTCATGTGGTTTTGCTCATTGGATTAGTCTTTGACGGGTTAGGTGCACATTCGATAACAGGTGCTTTCTTTTTAGGAGTGATTATCCCGAAGGGGTCGCTTAACAATGCAGTTCAAGATAAGGCTTTTGATTTTGTGTCTATGTTCATGATGCCTTTGTTTTTTCTCATTATTGGGGAGAGAATCCATATTGAAGAATTGGCTTTGGACACACATTGTATAACAGTTGTGATTGTTATTGTGTTGGCTTTCTTGGTAAAACTGGTGTGCATATTTGCAGTTTCTTGGATGTATCAGATGCCGTACATGGAAGGATTATCGCTCGCGCTTCTCATGAATACTAAAGGAACAATGCCGTTAATCATTTTATACACCGCCACAGATAGACTAGAATTGGAGAGGCAACCCTTTGTGGTAATGTTGTTGGCATGTTGGTTAATGACAGCTATTTCTGGTCCTGTCTTAGCTATGATCACGAAAACCCTTACTACAGGAAAAGTTCATGGAAGTCAAAGGAAGAGTATGCAAGGCACGCGACCAGACGCATCACTTAGAGTGTTGGCCTGTGTCCATTCAAAACACGAAGCCAATGCCATCATCGACCTTCTCAAAGCATCAAGTCCGTCTGTTAGGTCTCCTATTCAGGTGTTGGCAGTGGAGTTGATCAAGATGACAAACCGGCCAACTTCATCGCTAATCATAAAAGATGCTAGGAAGCCATCGTTTCGCTCAAATTCAAGCAGGTTAGACAGCATAAAGCGAAACAATGGGGACAACCTTGGCAGCTTCGACAACCTCAGCCAAGCCATCTTTGCTGAAAAACTCAGAGTTGTCTCCCAATATAACTCCATGCACAAAGATATCATAAACCTCTGCACCCGCAGACATGTAAACCTCATCATAACCATTCTCCACAAACAACCGACCTACGACGGATTAGGCGCAGGCACCGCCACCGCTAGAGCCATTAACATAATCAACAGAGACCATGCAAACAGAGATGAGAAGAAAATAGTGTTGGAGAATCTAATCAAAGAAGCACCGTGTTGTTTAGCCATTTTCGTCGACCGTGGTTTTGATGATGATGAGAATCGTTCTAAAGAGAAGAGAATCGCGATGTTCTACATTGGTGGTGTTGATGACCGTGAAGCACTTTCTTATGCTTGGAGAATGAGCAGGAACATGGAGGTTCAGTTAACAGTGGTTAGGCTTGTTTGGGACAATCCCGAAGATGGGTTTGATGAAGTGGACAAAGAATATTTAAAAACGTTTGCACATCAGACAATGGATACGCCAACGGTGAGGTATCTGGAGAAAACGGTGAAGAACGAGAAGGAAACTGTGAAGCTCTTAAATAGGATAGGGAATAAAGGATTTGATTTGTATATTATTGGGAGAGGCCATGGGAGGAAGATGTCATTGGCTCAAACAGTTGATCCTGTTTTGGATGAGCCTGTTTTGGGTCCTCTTGGGGATACTTTGTCTGATCTGAATTCTGCTTCTAAGACATCTATCTTGATATTTCAAAGAGATGCTGGAGCTCAGAGTGGTAGGGGTGGTGATAGTTTGGGGAAACATGATGTTTCTGCGACGCCTGTGCAGTTTTTTGATGGTGTTGTGAATTCACAACAGGAGATGTTTCATCCACCAGCGACATTTGGTCACAATATTGATGTATAA 2535 0.4178 MSSSNASYSIIIHPDGTSHVCFNKIKSHSSSLWIDNALEQTLPAFVLQFALTIALNRALLFLAESCNVPRIVPNIFTGFLLGSSALGKWEYFFSNVFPFNNMYPLETVGALTLVYYAFLLGLELDLKPITRFYYNKKAIIVALAGLVFSLPIGIGLYYLLITDMGRKPLSRLDNDKHMRGAIFWGLTLSCSSEFPEVAKILSDLKLLLTENGQLALTSSLINDLFSWTLLLLVLTQLYYASLFSLFVILVLVLACFYALHPLAKWLVKKFGNGDREFVETEVVFLLHVVLLIGLVFDGLGAHSITGAFFLGVIIPKGSLNNAVQDKAFDFVSMFMMPLFFLIIGERIHIEELALDTHCITVVIVIVLAFLVKLVCIFAVSWMYQMPYMEGLSLALLMNTKGTMPLIILYTATDRLELERQPFVVMLLACWLMTAISGPVLAMITKTLTTGKVHGSQRKSMQGTRPDASLRVLACVHSKHEANAIIDLLKASSPSVRSPIQVLAVELIKMTNRPTSSLIIKDARKPSFRSNSSRLDSIKRNNGDNLGSFDNLSQAIFAEKLRVVSQYNSMHKDIINLCTRRHVNLIITILHKQPTYDGLGAGTATARAINIINRDHANRDEKKIVLENLIKEAPCCLAIFVDRGFDDDENRSKEKRIAMFYIGGVDDREALSYAWRMSRNMEVQLTVVRLVWDNPEDGFDEVDKEYLKTFAHQTMDTPTVRYLEKTVKNEKETVKLLNRIGNKGFDLYIIGRGHGRKMSLAQTVDPVLDEPVLGPLGDTLSDLNSASKTSILIFQRDAGAQSGRGGDSLGKHDVSATPVQFFDGVVNSQQEMFHPPATFGHNIDV 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03460 844 Gene3D - 43 451 IPR038770 -
Vivi6g03460 844 Pfam Sodium/hydrogen exchanger family 58 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi6g03460 844 PANTHER CATION/H + ANTIPORTER 20 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03460 Vivi-Chr6 127050355 127053779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03460 18 799 Antiporter Super Family AT2G13620 31.089 1.97e-125 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03460 K26731 - vvo:131609937 1637.47