Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03433 ATGGCAATTGCGCGCACTGGAGTCTACGTCGACGACTATTTGGAGTACGCCAATACATTGCCCGCTGAGCTTCAGAGACTGCTTAACACCGTTCGTGAACTCGACGAACGATCCCAATCTATGATAAACCAGACTAGGCAGCAGACAAAGTACTGTATGGGGTTCTCATCTGGCTCTAAGAAGGGTAATCATAATCATAATTATAGTTATAATAATAATTACGCCAATGGCGACGATGACGCTTCTGTTGAAAAACTGCTAAAAGAAATCGAGGCAAACCAGGATAGTGCTTTGAGTCTATGCACTGAGAAGGTTTTGCTGGCACAGCAAGCATATGAACTGATAGATAGCCATGTAAAACGACTTGATGAGGATTTAAACAACTTCGCCGAAGATTTAAAGCAAGAGGGGAAAATATCACCAGATGAACCAGCCATTCTCCCCCCACTGCCTATTGTCCCTAAACCTGAAAAGCGCAGGCACGTGTATGGTACACCTCAATCGAAGAGACTTGATTACAGGGAAAGAGACTGGGATAGAGACTTTGAGCTGATGCCTCCACCAGGAGGCCATAAGAAGGATTATGCGACCCCTATGGATGTTGATCAACCCATTGATCCAAATGAACCTACATACTGTGTTTGCCATCAGGTATCTTTTGGAGACATGATTGCCTGTGACAATGAAAATTGCCGAGGAGGTGAATGGTTCCACTATTCATGTGTTGGCCTGACCCAAGAAACAAGGTTCAAGGGAAAGTGGTATTGTCCAACTTGCAGATTACAACCACACTGCTAA 798 0.4449 MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSGSKKGNHNHNYSYNNNYANGDDDASVEKLLKEIEANQDSALSLCTEKVLLAQQAYELIDSHVKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPIVPKPEKRRHVYGTPQSKRLDYRERDWDRDFELMPPPGGHKKDYATPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCRGGEWFHYSCVGLTQETRFKGKWYCPTCRLQPHC 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03433 265 PANTHER INHIBITOR OF GROWTH PROTEIN 2 260 IPR028651 -
Vivi6g03433 265 Gene3D - 5 127 - -
Vivi6g03433 265 CDD PHD_ING 212 259 - -
Vivi6g03433 265 SMART ING_2 9 129 IPR024610 -
Vivi6g03433 265 FunFam PHD finger protein ING 204 262 - -
Vivi6g03433 265 Coils Coil 24 44 - -
Vivi6g03433 265 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 129 IPR024610 -
Vivi6g03433 265 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 204 262 IPR013083 -
Vivi6g03433 265 SMART PHD_3 212 260 IPR001965 -
Vivi6g03433 265 SUPERFAMILY FYVE/PHD zinc finger 188 261 IPR011011 -
Vivi6g03433 265 CDD ING_plant 19 126 - -
Vivi6g03433 265 ProSiteProfiles Zinc finger PHD-type profile. 210 262 IPR019787 -
Vivi6g03433 265 Pfam PHD-finger 212 260 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03433 Vivi-Chr6 126571394 126573707 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Vivi6g03433 ING 1.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03433 - - lang:109339676 479.944