Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03385 ATGCTTTTGAGCTTGCAAAACACCATGAAAATGGGCTTCATAACACTCATAACATTTCTACTTTTCATAATGCCTGCACACTCTTCCTCCAAATATGTTGGAAACAACATGCTCACAAATCGAAAGATTTTCCTCAAACAAGAAGCCTTAACCTCTTACGCTGTCATCTTTGACGCTGGTAGTACTGGCACTCGAGTCCATGTTTACCATTTTGACCAAAACTTAAACCTCCTTCACATTGGCAATGATATTGAGTTTGTTAACAAGGTCACTCCAGGTTTGAGTGCATACGCTGCTAATCCTGGAAAAGCAGCAAAATCTATTATTCCACTTCTAGAAGAAGCTGAAAGTGTGGTTCCTGAAGATCTGCACACAAAAACACCTCTTAAACTTGGGGCAACTGCAGGTTTAAGGCTCTTGGATGGAGATTCTGCTGAAAAGATATTACAATCGGTGAGAGACATGTTCAACAACAGAAGTGCCCTCAATGTTCAACCTGATGCTGTTTCTCTTATAGATGGAACCCAAGAAGGTTCTTATATGTGGGTGACAGTTAACTATGTATTAGGAAATTTGGGAAAAAGCTTTGCAAAAACAGTTGGAGTAATAGATCTTGGAGGTGGTTCACTTCAAATGACATATGCAGTGTCAAAGGAAACAGCTAAAAATGCTCCACAAGTTGCAGATGGTGAAGATCCATACATCAAGAAAATTGTACTCAATGGAAAGCAATATGATCTCTATGTTCATAGTTACCTAGGGTTTGGTAAAGAAGCAACTAGAGCACAGGTTTTGAATGTCACTTTTGGATCTGCTAACCCTTGCATCTTACCTGGATTTAATGGAATCTTTAAATATTCAGGAGTGGAGTATAAGGCTTTTGCCCCAACTTATGGCGCCAACTTCGACGAATGCAAAGAGATAATTCTTAAGGTTCTTAGATTGAATGATCCATGTCCTTCTTCAAGTTGCTCTTTTAGAGGAATATGGAATGGTGGAGGAGGAAGTGGCCAGAAAAATCTTTTTGCTGCTTCAGCTTTCTCATACCTAACTAAAGATGTTGGTTTGGCTGACCCAACTAAACCTAATTCCAAAATTCTTCCGGGAGATCTCGAAACCGAAGCTAAAAGAGCTTGTGCATTAAACTTAGAGGATGTGAAATCGATTTATCCACGTCTTACCGTTGAAAAGCATCCATATGTATGCTTGGATCTTTTATACCAGCATGTGTTACTCGTCAAAGGATTTGGGTTGGATGCACAACAAGAGATTACAATGGGGACTGGAATTCAGTATCAGAATTCTGTGGTTGAAGCTGCATGGCCTCTAGGTACTGCAGTGGAAGCTATATCAGCATTGCCTAAGTTTGAGAGATTAATGTATTTCATTTAG 1392 0.3958 MLLSLQNTMKMGFITLITFLLFIMPAHSSSKYVGNNMLTNRKIFLKQEALTSYAVIFDAGSTGTRVHVYHFDQNLNLLHIGNDIEFVNKVTPGLSAYAANPGKAAKSIIPLLEEAESVVPEDLHTKTPLKLGATAGLRLLDGDSAEKILQSVRDMFNNRSALNVQPDAVSLIDGTQEGSYMWVTVNYVLGNLGKSFAKTVGVIDLGGGSLQMTYAVSKETAKNAPQVADGEDPYIKKIVLNGKQYDLYVHSYLGFGKEATRAQVLNVTFGSANPCILPGFNGIFKYSGVEYKAFAPTYGANFDECKEIILKVLRLNDPCPSSSCSFRGIWNGGGGSGQKNLFAASAFSYLTKDVGLADPTKPNSKILPGDLETEAKRACALNLEDVKSIYPRLTVEKHPYVCLDLLYQHVLLVKGFGLDAQQEITMGTGIQYQNSVVEAAWPLGTAVEAISALPKFERLMYFI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03385 463 Gene3D Exopolyphosphatase. Domain 2 173 433 - -
Vivi6g03385 463 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 172 187 IPR000407 GO:0016787
Vivi6g03385 463 Gene3D - 53 446 - -
Vivi6g03385 463 CDD NBD_sugar-kinase_HSP70_actin 55 242 - -
Vivi6g03385 463 FunFam Apyrase 1 173 431 - -
Vivi6g03385 463 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 13 452 IPR000407 GO:0016787
Vivi6g03385 463 Pfam GDA1/CD39 (nucleoside phosphatase) family 51 454 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03385 Vivi-Chr6 125816731 125819639 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03385 24 452 Calmodulin-binding Proteins AT3G04080 47.674 6.82e-141 410