Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03384 ATGGAGTTGTTCATTAAACTCATCACTTTTCTCCTCTTGTTAATGCCTGCAATCACTTCTTCACAATATTTAAGAAACAACATTCTCAATATTCGTAAGGTGTTACCAAAACAAGAGGCAGTTACCTCTTACGCTGTAGTCTTTGATGCTGGTAGCACTGGTAGTCGTGTCCATGTTTACCATTTTGACCAGAACTTAGATCTTTTACATATTGGCAACGATGTTGAGTTGTATAATAAGACAACACCTGGTTTGAGTGCATACGCAGATAATCCAGAACAAGCTGCAAAATCTTTGATTCCACTTTTAGAGCAAGCTGAAAATGTGATTCCTGAAGATCTGCATCCCAAAACACCGGTCACACTTGGGGCCACTGCAGGATTAAGACTTTTAGATGGGGATGCTTCTGAAAAAATATTACAATCGGTAAGGGATATGCTGAGCAACAGAAGTAACTTCAACGTTCAATCTGATGCAGTTTCTATTATAGATGGAACCCTCGAAGGTTCTTATCTCTGGGTGACAGTTAACTATCTATTGGGAAATTTGGGAAAAAGTTTCACAAAAACAGTTGGAGTAATGGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCTGTGTCAAAGAAAACCGCTGAAAATGCTCCAAAAGTTGCAGATGGAGAAGATCCATACATCAAGAAAATTGTACTCAAGGGAAAACCATATGATCTCTATGTTCACAGTTACTTACACTTTGGTAGAGAAGCATCTCGAGCAGAGATTTTGAAGGTCACTTATAATTCTGCTAATCCTTGCCTTTTAGCCGGATTTGATGGTACCTATACATATGCAAGAGAAGATTTTAAGGCCACTGCCCCTCCTTCTGGAGCCAACTTTTATAGATGCAAAAGTATAATTCGTAGAGCTCTTAAATTGAATTATCCATGTCCCTATGAGAAGAATTGCACTTTTGGTGGAATTTGGAATGGTGGAGGAGGAAGAGGACAGAAAAAACTTTTTGCTGCTTCATCTTTCTTTTACCTAGCTGAAGATGTTGGTATTATTCGTGCAAATAGACCTAATTCGAAAATTCGTCCGGTGGATCTTGAGATTGCAGCTATGAGAGCTTGTAAATTGAATGTTGAGGATGCTGCATCAGCTTACCCAGCTCTTGAGGAGTCTAATATAGTTCCATATGTATGTATGGATCTTATATATCAACATGAGTTGCTCGTTCATGGATTTGGCCTAAGTCCATTGCAAGAGATTACAGTTGGGAAGCAGATTGAATATGAAGATGCTGTTGTGGAAGCTGCATGGCCTCTAGGAAATGCTGTAGAAGCCATATCATCTTTACCTAAATTTGAACGACTCATGTATTTTGCTTAA 1371 0.3895 MELFIKLITFLLLLMPAITSSQYLRNNILNIRKVLPKQEAVTSYAVVFDAGSTGSRVHVYHFDQNLDLLHIGNDVELYNKTTPGLSAYADNPEQAAKSLIPLLEQAENVIPEDLHPKTPVTLGATAGLRLLDGDASEKILQSVRDMLSNRSNFNVQSDAVSIIDGTLEGSYLWVTVNYLLGNLGKSFTKTVGVMDLGGGSVQMAYAVSKKTAENAPKVADGEDPYIKKIVLKGKPYDLYVHSYLHFGREASRAEILKVTYNSANPCLLAGFDGTYTYAREDFKATAPPSGANFYRCKSIIRRALKLNYPCPYEKNCTFGGIWNGGGGRGQKKLFAASSFFYLAEDVGIIRANRPNSKIRPVDLEIAAMRACKLNVEDAASAYPALEESNIVPYVCMDLIYQHELLVHGFGLSPLQEITVGKQIEYEDAVVEAAWPLGNAVEAISSLPKFERLMYFA 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03384 456 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 6 446 IPR000407 GO:0016787
Vivi6g03384 456 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 44 173 - -
Vivi6g03384 456 Gene3D - 44 439 - -
Vivi6g03384 456 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 163 178 IPR000407 GO:0016787
Vivi6g03384 456 Gene3D Exopolyphosphatase. Domain 2 164 424 - -
Vivi6g03384 456 Pfam GDA1/CD39 (nucleoside phosphatase) family 42 447 IPR000407 GO:0016787
Vivi6g03384 456 CDD NBD_sugar-kinase_HSP70_actin 46 233 - -
Vivi6g03384 456 FunFam Apyrase 1 164 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03384 Vivi-Chr6 125797218 125801230 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03384 43 445 Calmodulin-binding Proteins AT3G04080 55.583 2.09e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03384 K14641 - ag:CAA83655 706.057