Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03383 ATGGAGTTCCTAATTAAACTTATCACTTTTCTACTATTTTCTATTCCTGCTATCACTTCCTCCCAATACTTAGGAAACAACAACCTACTCACCAATAGAAAGATTTTCCAAAAACAAGAGGAAATTTCCTCTTATGCTGTTGTATTTGATGCTGGTAGCACTGGTAGTCGTATTCATGTTTACCATTTCGACCAAAACTTGAATCTCCTTCACATTGGGAAAGGTGTTGAGTATTATAATAAGATAACACCTGGCTTGAGTTCATATGCTAATAATCCAGCACAGGCTGCAAAATCACTCATTCCACTTTTAGAGCAAGCAGAAGATGTGGTCCCTGACGAACTTCATCCCAAGACACCTGTTAGACTTGGGGCAACAGCAGGTTTAAGGCTTTTGAATGGAGATGCTTCTGAAAAGATATTGCAATCGGTAAGGGATATGCTGAGCAACAGAAGTACCTTCAATGTTCAACCAGATGCAGTTTCTATAATTGATGGAACCCAAGAAGGTTCTTATCTATGGGTGACAGTTAACTATGCATTGCAAAATTTGGGAAAAAAGTACACAAAAACAGTTGGAGTAATGGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCAGTTTCAAAGAAAACAGCCAAAAATGCACCAAAAGTTGCAGATGGAGAAGATCCATACATCAAGAAAATTGTACTCAAGGGAATACCATATGATCTCTATGTTCACAGTTACTTACACTTCGGTAGAGAAGCATCTCGAGCCGAGATTTTGAAGCTCACTCCGAATTCTCCTAACCCTTGTCTCTTAGCCGGATTCGATGCGATTTATACATATTCCGGAGAAGAGTTTAAGGCAACTGCTTCCACTTCTGGTGCAAACATTAATAGATGCAAAAACACAATTCGTAAAGCTCTTAAGTTGAATTCTCCATGTCCTTATCAGAATTGTACTTTTGGTGGAATTTGGAATGGTGGAGGAGGAAATGGACAGAAAAACCTCTTTGCTTCTTCATCTTTCTTTTACCTACCTGAAGATACCGGTATGGTTGATGCAAGCGCACCTAATTTCATACTTCGCCCGGTCGATATCGAGACTAAAGCTATAGAAGCTTGTGCATTAAAATTTGAGGATGCAAAATTGGTTTATCCGTTTCTTGATAAGAAAAAAGTAGCTGCTTATGTATGCATGGATCTGATATATCAGTATGTGTTACTGGTTGATGGATTTGGTCTTGATCCATTGCAAAAGATTACATCAGGGAAGGAAATTGAATACCAAGATGCTATTGTGGAAGCTGCATGGCCTCTAGGCAATGCTGTAGAAGCCATATCATCTTTACCTAAATTTGAACGATTGATGTATTTTGTTTAA 1371 0.3858 MEFLIKLITFLLFSIPAITSSQYLGNNNLLTNRKIFQKQEEISSYAVVFDAGSTGSRIHVYHFDQNLNLLHIGKGVEYYNKITPGLSSYANNPAQAAKSLIPLLEQAEDVVPDELHPKTPVRLGATAGLRLLNGDASEKILQSVRDMLSNRSTFNVQPDAVSIIDGTQEGSYLWVTVNYALQNLGKKYTKTVGVMDLGGGSVQMAYAVSKKTAKNAPKVADGEDPYIKKIVLKGIPYDLYVHSYLHFGREASRAEILKLTPNSPNPCLLAGFDAIYTYSGEEFKATASTSGANINRCKNTIRKALKLNSPCPYQNCTFGGIWNGGGGNGQKNLFASSSFFYLPEDTGMVDASAPNFILRPVDIETKAIEACALKFEDAKLVYPFLDKKKVAAYVCMDLIYQYVLLVDGFGLDPLQKITSGKEIEYQDAIVEAAWPLGNAVEAISSLPKFERLMYFV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03383 456 Gene3D - 45 439 - -
Vivi6g03383 456 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 45 174 - -
Vivi6g03383 456 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 164 179 IPR000407 GO:0016787
Vivi6g03383 456 FunFam Apyrase 1 165 424 - -
Vivi6g03383 456 Gene3D Exopolyphosphatase. Domain 2 165 424 - -
Vivi6g03383 456 CDD NBD_sugar-kinase_HSP70_actin 47 237 - -
Vivi6g03383 456 Pfam GDA1/CD39 (nucleoside phosphatase) family 39 447 IPR000407 GO:0016787
Vivi6g03383 456 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 13 446 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03383 Vivi-Chr6 125660747 125663826 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03383 44 445 Calmodulin-binding Proteins AT3G04080 54.342 8.87e-149 430
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03383 6 125660747 125663826 Vivi6g03383 6 125660747 125663826 ECH