Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03380 ATGCTGAAGCGTCCTAGCCGTCAGGAGTCGCTCTCCGATAAGATCTACAGATTCCGAGGCACTCTGCTTGTTGTCTCGATCCCGCTCGTTCTCATCACGTTTGTTCTTTACATGATGCCTTCGAGCTCGAATTATGAGTCTGCCGGAGATTACGCTCTCGTTAGTCGGAAAATTTCGCCTGATAAAAAATCCGGTGGCTCGTATGCGGTCATTTTTGACGCCGGTAGCTCTGGCAGCCGCGTTCATGTTTTCCATTTCGATCATAAGCTAGATCTCGTTCATATTGGCAAAGATCTCGAACTTTTTGAACAGCTTAAACCAGGTTTAAGTGCGTATGCTAAGAATCCGAAGCAGGCAGCGGAATCTCTGATTTCACTCTTAGACAAAGCTGAGAGTGTTGTTCCTCGGGAATTGAGATCGAAGACACCAGTTCGAGTTGGGGCAACTGCAGGTTTGAGGTCTTTGGAAGGGGATGCATCTGATAAGATATTGCAAGCGGTAAGGGATTTGCTTAAGCACAGAAGCTCGTTGAAATCTGATGCTGATGCGGTTACAGTGCTGGATGGAACACAAGAAGGTGCTTTTCAATGGGTTACCATTAACTATCTATTGGGAAACTTGGGAAAAGATTATTCCAAGACTGTTGGGGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCCATCTCTGAGTCTGAGGCTGCCATGGCTCCAAAAGTAAAGGATGGAGATGATCCATATGTCAAGGAGATGTTCCTGAGGGGAAGAAAATATTACCTCTATGTTCACAGTTATTTGCGCTATGGTTTACTAGCTGCTCGTGCTGAGATTTTAAAGGCTACCGGTGATGCTGAAAACCCGTGTATCTTATCTGGCTATGATGGATCTTACAACTATGGAGGAAAATCATTTAAGGCATCATCCTCTGGAGCAGGCTTAAATGAATGCAAAAGCGTAGCTCTCAAGGCTCTCAAAGTCAATGAGTCATCTTGTACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGAGGTGGGGATGGACAGAAAAACCTCTTTGTTGCCTCATTTTTCTTTGACCGGGCTGCTGAGGCTGGTTTTGCTGATCCAAACAAACCAGTTGCAATAGTTCATCCTATGGATTTTGAAGAAGCTGCCAAGCAGGCTTGTCAAACAAAACTCAAGAATGCCAAATCCACTTATCCACGAGTTGAAGAAGGGAACCTTCCATATCTTTGCATGGATCTTATTTACCAGTATACCTTGCTTGTTGATGGGTTTGGCATATACCCATGGCAAGAGATTACATTGGTAAAGAAAGTTAAATACGAAGATGCCCTTGTTGAGGCAGCTTGGCCGCTAGGAAGCGCCATTGAAGCTGTATCGGCTACATAA 1404 0.4466 MLKRPSRQESLSDKIYRFRGTLLVVSIPLVLITFVLYMMPSSSNYESAGDYALVSRKISPDKKSGGSYAVIFDAGSSGSRVHVFHFDHKLDLVHIGKDLELFEQLKPGLSAYAKNPKQAAESLISLLDKAESVVPRELRSKTPVRVGATAGLRSLEGDASDKILQAVRDLLKHRSSLKSDADAVTVLDGTQEGAFQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAISESEAAMAPKVKDGDDPYVKEMFLRGRKYYLYVHSYLRYGLLAARAEILKATGDAENPCILSGYDGSYNYGGKSFKASSSGAGLNECKSVALKALKVNESSCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNKPVAIVHPMDFEEAAKQACQTKLKNAKSTYPRVEEGNLPYLCMDLIYQYTLLVDGFGIYPWQEITLVKKVKYEDALVEAAWPLGSAIEAVSAT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03380 467 FunFam Apyrase 1 188 445 - -
Vivi6g03380 467 Pfam GDA1/CD39 (nucleoside phosphatase) family 66 465 IPR000407 GO:0016787
Vivi6g03380 467 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 187 202 IPR000407 GO:0016787
Vivi6g03380 467 Gene3D - 68 461 - -
Vivi6g03380 467 Gene3D Exopolyphosphatase. Domain 2 188 445 - -
Vivi6g03380 467 CDD NBD_sugar-kinase_HSP70_actin 70 229 - -
Vivi6g03380 467 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 11 466 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03380 Vivi-Chr6 125617029 125624222 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03380 7 466 Calmodulin-binding Proteins AT3G04080 69.048 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03380 K14641 - gmx:100786073 828.935