Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03370 ATGGGAACCACTAGCCAAGAAACTCTACCTCATCTTCAAGACATGAAGGTGACAATCCACAAAACATCAATGGTTTTTCCATCAAAACAAACCGAGAACAAATCCATGTTTTTATCAAACATAGACAAGGTCCTCAATTTCGATGTAGAAATGGTTCAATTCTTCGAAGCCAACAAAGATTTTCCTCCTCAAATCGTGACCGAGAAGTTGAAAAAAGCTCTAGAAGATACTCTAGTGGCTTATGACTTCCTTGCTGGAAGATTGAAGAAGAACTCTGAAACCAATAGGTTGGAGATAGATTGCAATTCAGAAGGTGTTGGCTTTGTTGTGGCTTCTAGTGAGTACATGTTGGGTCAAATTGGAGACTTGGCTTATCCTAATCAAGCTTTTGCACAATTTGTTCATAACACTAAAGATTTTCTTAAGATAGGTGATATACCACTATGTGTTGTCCAGCTTACATCCTTCAAGTGTGGTGGTTTCGCCATTGGCTTCACAAGAAACCATTTAGCCTTTGATGGACATAGCTTCAAAACATTCTTGGACAATCTTTCTTCATTGGCTGCTAACATACCACTGACCGTCACACCTTTCCATGACAGACAACTCTTAGCCGCACGATTTCCTCCACGTGTCAGCTTCCTCCACCCTGAGATGGTCAAGTTCGATAATATACCTTTTGCAACTGAACATAGTGTCTTTAAAGCCTCCTCAGAAGAACTTGACTTTAAGGTTTTTCATCTAGGCTCTAAACATATCAACAATCTTAAGGAAAAAGCAAAGGATAACGACAACATTCATGTCACCAGTTTTAATGTCATTAGTGCGCATCTATGGAGATGCAAGACATTATCTGGCACATATGATTCTAATAAGTTATCAACTATATTATATGCTGTTGATATACGGTCTAGATTGAATCCTCCATTGCCGAAAGTTTATACGGGGAATGCGGTTTTAACTGCTTACGCTACAATGAAGTGTGGGGAATTAAAGGAATGCGAATTCTCAAAGTTGGTGGAGATGGTTAGGGAAGGATCAAGAAGAATGAATGATGAGTATGTGAAGTCAATTGTTGATTGGGGAGAGTTGTATAATGGTTTTCCAAATGGGGAGATTTTGGTGTCTTCGTGGTGGAGATTAGGGTTTGAAAAAGTGGAGTATCCATGGGGAAAACTTAAGTATTGTTGTCCAGTGGTGTATCGTAGGAAGGATATTATACTATTATTTCCTCATTTTCATGGATCAAGTGAAGTTGGTGGTGATGATGGGGTGAATATTATAGTGGCTCTTCCTCCTAAAGAAATGGAAAATTTTCAAAGACTCTTTTATACGTTTTAA 1341 0.3863 MGTTSQETLPHLQDMKVTIHKTSMVFPSKQTENKSMFLSNIDKVLNFDVEMVQFFEANKDFPPQIVTEKLKKALEDTLVAYDFLAGRLKKNSETNRLEIDCNSEGVGFVVASSEYMLGQIGDLAYPNQAFAQFVHNTKDFLKIGDIPLCVVQLTSFKCGGFAIGFTRNHLAFDGHSFKTFLDNLSSLAANIPLTVTPFHDRQLLAARFPPRVSFLHPEMVKFDNIPFATEHSVFKASSEELDFKVFHLGSKHINNLKEKAKDNDNIHVTSFNVISAHLWRCKTLSGTYDSNKLSTILYAVDIRSRLNPPLPKVYTGNAVLTAYATMKCGELKECEFSKLVEMVREGSRRMNDEYVKSIVDWGELYNGFPNGEILVSSWWRLGFEKVEYPWGKLKYCCPVVYRRKDIILLFPHFHGSSEVGGDDGVNIIVALPPKEMENFQRLFYTF 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03370 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 443 - -
Vivi6g03370 446 Gene3D - 228 446 IPR023213 -
Vivi6g03370 446 Gene3D - 11 220 IPR023213 -
Vivi6g03370 446 Pfam Transferase family 15 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03370 Vivi-Chr6 125403224 125405802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03370 15 444 Monolignol Biosynthesis Gene Families AT5G48930 30.290 4.32e-58 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03370 K13065 K15400 gmx:100780971 629.787