Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03342 ATGGAAGATAGTATGGAAGAGGAACAAAGTTATCATCCCCAAGCTGTCTCCTACGGTAACTCGGCGCATTCTAAGTCACCAGTCGTATCTTCGGATGATGAATGGGTGCCAAATTGTGATGAGGAATTAAAACCTAAGGTTGGGCAACTATTTGATACGTTAGAGGAAGGTGGACAGTTTTACAAAAACTATGCTCATACTGTTGGATTTAGTGTGCGTTCTTCGTCAGAAACTAAAGATAAAAATGGCGTGAAGCGTTGGAAGTACTATGTCTGTTCGAAAGAAGGTTATTTACCAAATAAGACGGAAGTTAAAGAGCAAAGTGAACCAAATGTCAAGAATAGAAGAAGAAGTCTTACAAGAGAAGGATGCAATGCAAAAGTTGTTTTCAAACTTGTAGAAGGTAAATATGAGCTTTTTCGATTTCATGAAAGTCATACACATTCACTTGCTTCACCTATGAAGAGACAATTTTTGAGATCAGCAAGAAAAGTAAATCCTATTCACAAGAGTTTATTGCATGCATATAATAGAGCAAATATCGGGCCTTCAAAAACATATCAGTTATTGAAAGAACAATGTGGAGGTTATCAAAATATTGGGTGCACACAAAGAGATCTTCAAAATTATTCAAGAGATTTAAAGACATTGATTAAAGATTCTGATGCACATGTTTTTATTGATAACTTCAAAAGGAAACAAGAAGTTGATCCATCATTCTACTATGCATATGAGGTAGACGAAGAAGGTCGACTGAAACATGTTTTTTGGGCAGATGGTATTTGTAGGAAAAATTATTTATTGTTTGGGGATGTGGTTTCATTTGATACTACATATAGAACAAATAAATATTCTATGATATTTGCACCATTTACCAGGGTAAATCATCATAGACAATCTATTACTTTCGGAGCATGTTTTTTAGCAAATGAAAAAGTTAACTCATTCATATGGTTGTTTAGAAAGTTTTTGGAAGCAATGGGAGGGCACAATCCAACTCTTCTAATAACAGATCAAGATCCTGCCATGAAAGTTGCCATTGAAAACGTTTTCACTTCTTATATTCATAGATTTTGTATGTGGCACATTATGAAAAAAGTTTCTGAAAAAGTGGGTGTTTCTTTAAATGCTAACGATGAGTTCAATAATAGTTTCAAGTCATGTGTTTGGAGATCTGAGACAACATCTGATTTTGAAGAAACATGGAAGTCTATAATTAGTAGGTTTGAGTTGGAAAATAATGAGTGGTTATCTCATATGTTTGATATTCGAAGCATGTGGATTCCAGCATACTTTAAAGATATTTTTTTGGCTGGAATATTGAGAACAACATCAAGGTCAGAAAGTGAGAATTCTTTTTATGGTAATTTCTTGAATCCTAATGTTAGCTTGGTCGAATTTTGGATGAGGTATGAATCTGCAATAGAAGCACAAAGACATAAAGAGTTACTTGCTGATAATAATTCACTTCATTCAATACCAAAGCTAATTGTAGCGGGGAAAATCTGA 1509 0.3413 MEDSMEEEQSYHPQAVSYGNSAHSKSPVVSSDDEWVPNCDEELKPKVGQLFDTLEEGGQFYKNYAHTVGFSVRSSSETKDKNGVKRWKYYVCSKEGYLPNKTEVKEQSEPNVKNRRRSLTREGCNAKVVFKLVEGKYELFRFHESHTHSLASPMKRQFLRSARKVNPIHKSLLHAYNRANIGPSKTYQLLKEQCGGYQNIGCTQRDLQNYSRDLKTLIKDSDAHVFIDNFKRKQEVDPSFYYAYEVDEEGRLKHVFWADGICRKNYLLFGDVVSFDTTYRTNKYSMIFAPFTRVNHHRQSITFGACFLANEKVNSFIWLFRKFLEAMGGHNPTLLITDQDPAMKVAIENVFTSYIHRFCMWHIMKKVSEKVGVSLNANDEFNNSFKSCVWRSETTSDFEETWKSIISRFELENNEWLSHMFDIRSMWIPAYFKDIFLAGILRTTSRSESENSFYGNFLNPNVSLVEFWMRYESAIEAQRHKELLADNNSLHSIPKLIVAGKI 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03342 502 MobiDBLite consensus disorder prediction 1 37 - -
Vivi6g03342 502 Pfam FAR1 DNA-binding domain 59 151 IPR004330 -
Vivi6g03342 502 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 496 IPR031052 GO:0006355
Vivi6g03342 502 MobiDBLite consensus disorder prediction 10 28 - -
Vivi6g03342 502 Pfam MULE transposase domain 272 366 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03342 Vivi-Chr6 124870883 124873144 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi6g03342 MULE 3.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03342 - - vvo:131614598 1039.25