Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03299 ATGGTTGCCAACTCGTTCGAGATTAACGATTCTATTGCCAACGACAGTGGTAGTGGCGTCGTTCCGCAGCATTTGGTGGTTTCTCCGGAGACTGAGACGAACCCTAAGGTTAAAGTAACGGTGAAATACGGTGGTGCTAAGAAAGCTGAACCGAAAGAAACACCAATGTCTCAACGTAGATCGAGCTCTAGAATCCAGGCAGCTAAGCTTAAAGAGATGGAGGAGGTTAAGCTTCGACGGAGTGTAGAGGTTGTCGAAGAGCGGAAGAAATCAAGCGTGGTTGTGACGGCAAAGGGAAAGTCGAACAAACGCGTTAAGAAAAGTCATGGCGAGGAAGAGAGCGTGGTGAAAGAAGAGGTTGAGTCTGATTTACAGACAAAGAGTAATGAGGAGGCTGCTCCGGAGAAACAAATGAAGAAGAAGAAGTCTGCTATGGATGAGAAGCGTGAGCTGATGGAGGTTTGGGATGAGAAAATGAAGGTGGATTCTGAAAATCCAGGTGATGCATCAGCTGAAAAGAGTTACGCAGCTAAGGTGAAGGATACTATCAGATTGTTTAATAAACACTATCTCCATTTGGTTCAGGAGGAAGAGGAGAGGTGTGCTAAGGCAAGAGCTGAAGCTGAGAAGAAGAAAAAATCTCCCAAAAAATCTCCCAAGAAATCTCCTGCAAAGAAATCTCCTGGGAAGAATTCTAAGTCAGCTGCTGGGAAGAAAAATGCTAAGAAGGATACTTTGCCTGTAGAACCAAAGAGCGGCGCCGCCAAGCGACCTGATCTGAAGGCATTGACCAAGATGATGCAAAATAATGAGATACTGTTCCCTGAAAAGAGAATTGGCGATATTCCAGGCGTCGAGGTTGGATATCAGTTTTATTCTCGTGCGGAAATGGTGGCGATTGGTTTTCATAGCCACTGGTTAAATGGCATCGATTATATGGGCCAATCTTATTCCAAAGAGTACAACAGCTACAATCTCCCAGTTGCTGTGGCCATTGTTATTTCTGGAATGTATGAAGATGACCTCGATAATGCCGAAGATGTCGTTTACACTGGTCAAGGTGGCCACAACCTGACTGGTAATAAGCGTCAAATGGGAGATCAGAAAATGGAGCGGGGTAATTTAGCACTCAAGAACTGTTCAGAGCAATGTGTGCCAGTAAGGGTGATTCGAGGTCATAACTCTCGTGACAGTTATACTCGTAAAGTTTATACATATGATGGATTGTACAAGGTTGTTAATTATTGGGCAGAGAAGGGAATATCCGGCTTCACAGTCTTCAAGTTTCGGCTTAGGAGGGTTGATGGACAGCCTACATTAACCACGAATCAGGTTTATTTCACAAGTGGACGCGTGCCTCAGTCTGTTGCAGAAATACGAGGGCTGGTATGCGAGGATATCACTGGAGGTCAGGAAGAAATACCAATTCCAGCTACAAATTTGGTTGATGAGCCCCCTGTTCCACCCACAGGTTTCAATTACTTCAAGTCTCTGAAGGTTGCAACAAGTGTTAAACTTCCTGTGAATGCCTCTGGGTGCAAATGCAAAGGCAATTGTACTGATACAAAAACCTGTGAATGTGCAAAGCGCAATGGCTCTGAGTTTCCCTATGTATCTAAGGATGGTGGCAGATTGGTTGAAGCTAAAGATGTCGTGTTTGAATGTGGCCCCAATTGTGGTTGTGGTCCTAGTTGTATGAATCGGATTTCTCAAAAAGGACCTCGATATCGTCTGGAGGTTTTTCGCACTGCAAAAAAAGGGTGGGCTGTACGATCCTGGGATTTTATTCCATCTGGGGCACCCGTGTGTGAGTACACGGGAATTCTGGGCAGGACTGATGATGTAGACAGTTGTTTAGAAAACAACTATATATTTGAGATCGATTGCCTCCAGACAATTAAAGGTCTTGGAGGAAGGGAGAGGCGATCACAAAATGTACCATATGCTGCCAATCTTTTGGACAAATATGATGACCAAAGTCCTGATAGTGCACCAGAGTTTTGTATTGACGCAGGATCTACTGGAAATATTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATTTGTTTGTACAATGTGTTTTGAGCACACACCATGATTTGCGTTTGGCTCGAGTGATGCTGTTTGCTGCTGACAACATACCCCCATTACAGGAGTTGACATATGACTATGGCTATGCTCTTGATAGCGTCTTGGACTCTGATGGGAAGATAAAGCAAATGCCGTGTTATTGTGGAGCTTCAGGCTGCAGAAAGCGATTATTCTAA 2268 0.4431 MVANSFEINDSIANDSGSGVVPQHLVVSPETETNPKVKVTVKYGGAKKAEPKETPMSQRRSSSRIQAAKLKEMEEVKLRRSVEVVEERKKSSVVVTAKGKSNKRVKKSHGEEESVVKEEVESDLQTKSNEEAAPEKQMKKKKSAMDEKRELMEVWDEKMKVDSENPGDASAEKSYAAKVKDTIRLFNKHYLHLVQEEEERCAKARAEAEKKKKSPKKSPKKSPAKKSPGKNSKSAAGKKNAKKDTLPVEPKSGAAKRPDLKALTKMMQNNEILFPEKRIGDIPGVEVGYQFYSRAEMVAIGFHSHWLNGIDYMGQSYSKEYNSYNLPVAVAIVISGMYEDDLDNAEDVVYTGQGGHNLTGNKRQMGDQKMERGNLALKNCSEQCVPVRVIRGHNSRDSYTRKVYTYDGLYKVVNYWAEKGISGFTVFKFRLRRVDGQPTLTTNQVYFTSGRVPQSVAEIRGLVCEDITGGQEEIPIPATNLVDEPPVPPTGFNYFKSLKVATSVKLPVNASGCKCKGNCTDTKTCECAKRNGSEFPYVSKDGGRLVEAKDVVFECGPNCGCGPSCMNRISQKGPRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILGRTDDVDSCLENNYIFEIDCLQTIKGLGGRERRSQNVPYAANLLDKYDDQSPDSAPEFCIDAGSTGNIARFINHCCEPNLFVQCVLSTHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLDSDGKIKQMPCYCGASGCRKRLF 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03299 755 SMART PostSET_3 739 755 IPR003616 -
Vivi6g03299 755 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 59 748 - -
Vivi6g03299 755 Pfam Pre-SET motif 468 568 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi6g03299 755 Gene3D SET domain 457 755 IPR046341 -
Vivi6g03299 755 MobiDBLite consensus disorder prediction 237 258 - -
Vivi6g03299 755 SMART preset_2 464 560 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi6g03299 755 SMART set_7 576 731 IPR001214 GO:0005515
Vivi6g03299 755 MobiDBLite consensus disorder prediction 43 57 - -
Vivi6g03299 755 SUPERFAMILY PUA domain-like 262 452 IPR015947 -
Vivi6g03299 755 MobiDBLite consensus disorder prediction 1 18 - -
Vivi6g03299 755 MobiDBLite consensus disorder prediction 88 151 - -
Vivi6g03299 755 ProSiteProfiles SET domain profile. 576 725 IPR001214 GO:0005515
Vivi6g03299 755 MobiDBLite consensus disorder prediction 204 260 - -
Vivi6g03299 755 MobiDBLite consensus disorder prediction 41 68 - -
Vivi6g03299 755 Pfam SET domain 587 725 IPR001214 GO:0005515
Vivi6g03299 755 SMART G9a_1 275 437 IPR003105 -
Vivi6g03299 755 ProSiteProfiles Post-SET domain profile. 739 755 IPR003616 -
Vivi6g03299 755 MobiDBLite consensus disorder prediction 105 151 - -
Vivi6g03299 755 Gene3D - 263 450 IPR036987 -
Vivi6g03299 755 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 85 755 IPR025794 GO:0016571
Vivi6g03299 755 SUPERFAMILY SET domain 461 731 IPR046341 -
Vivi6g03299 755 Coils Coil 187 214 - -
Vivi6g03299 755 MobiDBLite consensus disorder prediction 1 21 - -
Vivi6g03299 755 ProSiteProfiles Pre-SET domain profile. 511 573 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi6g03299 755 Pfam SAD/SRA domain 279 437 IPR003105 -
Vivi6g03299 755 ProSiteProfiles YDG domain profile. 280 433 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03299 Vivi-Chr6 123822516 123829608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03299 266 755 EF-hand Containing Proteins AT5G13960 66.260 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi6g03299 SAD_SRA 9.9e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03299 K11420 - gmx:100796701 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03299 6 123822516 123829608 Vivi6g03299 6 123822516 123829608 ECH