Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03281 ATGGGGGGAATAGGAAAGACAACAATTGCTAAAGTCTTGTTTGCCAAACTATTTGCCCAATATGACCATGTCTGCTTTGCTAAAGGAAAAGAATCTTCACCTAGTAAGCTTCTCTCTGAGCTCCTGAAGGAAGAAATCTCCCCATCTAACATTGTAGGTTCCACATTTCATATGAGGAGGCTCAGAAGTAGAAAGGTTTTCATTGTTCTTGACAATGTTGACAACTTAGATCAGTTTGAATATTTATGTAGGGGTTACAATGACCTGAGTAACGATAGCAGACTTATCATAACAACAAGAGACAGACAGTTGCTGAGTGAAAGAGTTGATTGGATATATAAGGTCAAGCAATGGGAAGATCCGGAATCGCTAAAGCTTTTTTGCCTAGAAGCCTTCCAGCAAAACCTTCCGCCAAGAAACTACGAGGATCTCTCACAAAGCGCGGTCACTTATGCAGGGGGGATTCCACTGGCACTGAAGCTTTTGGCTTTGCATCTTCGTTCAAGAGATATTGAGTTTTGGGAAAGTACTTTCAGGAAGCTCGATAAGCATCCTAAAGAGGATATTCACAAAGTTTTAAAGTTGAGCTATGATGGATTAGATGCACTGGAGAAGAAGATATTTCTAGACATTGCATTCTTTTTCAAAGGAGAAAACAAAGATCGTGTCGCCAGGATACTAGATGCTTGTGGTTTCGAAGCAAGTAGTGGAATTGTAGTCCTCAAAGACAAGGCCTTGATTAGCATCTCAAATAACCTTACAATACAAATGCATGACTTGCTACAAAAAATGGGTTCGGACATAGTATGTAATGACTCTGGCATAAACCCTGCAATACATACTCGAACTCGACTCAGTGGAGCAGAAGCTCGTGCAGTAATTGAAGAAAACAAGGGGAATAGCTCAATTGAAGGCATAACATTGGATTTGTCTCAAATTAATGATATGCTTTTAAGTGCGGACACATTCACCAAGATGAAAGCCTTAAGAATTCTCAAATTCTATGCACCCTCTAACCAGAGATGTACCAATACATATCTCAACCTTCCCACATTCCTTGAGCCGTTTTCAAATCAACTGAGGTATTTTGAGTGGAATGGATACCCTTTTGAGTCTCTTCCACAACCTTTTTGCGCTAAGTTTCTTGTTGAGATCCACATGCCGCACAGCAATCTAAAACAACTGTGGCAGGGAACGGAGGAACTTGGTATGTTAGAAGGAATTGACCTGAGTGAATGCAAGCATTTTGAACGGCTTCCGGATTTGTCTAAGGCCTCGAGTCTTAAATGGGTAAATCTCTCTGGTTGTGAGAGTCTGGTTGATCTTCATCCATCTGTTTTATGCGCAGAATCGCTTGTTACCTTGATACTGGATGGGTGCACAAAGGTTAGAAGCGTTAGAGGTGAAAAACATTTTATTTTCTTGGAGAAGATCAGTGTGGATGGGTGCACAAGTCTGGAAGAATTTGCAGTGTCCTCGGATTTAATTGAAAATTTGGATTTAAGCAGTACAGGGATCCAAACACTGGACCTATCAATCGGGCGTCTTCAAAAACTGAAACGACTTAATCTCCAGAGTTTAAGACTCAAGCATCTTCCAAAAGAGTTATCTAGTGTGAGATCTATTAAGGAGTTGAAGATTTCTGGCAGCAGACTAATGGTTGAGAAACAACAGCTACATGAACTGTTTGATGGCTTACAATCCATAAAAATATTACATATGAAGGATTTTAGAAACCTGTCTGAACTCCCGAACAACCTCAGCGTCTTGTCAAAATTAAAGGAATTAAACCTTGATGGAAGCAACGTGAAGAGGTTACCTGAAAGCATAAATCAGCTTCAAGAGCTGGAAACTCTGTCTTTGGTGAATTGTAGGAAGCTTCGGTGCCTACCAAAGCTTCCGCCTCTCATCAAACAGTTATATGCTGTTAACTGCACGTCACTGGTTTCGGTGTCAAACCTCAAAACATTAGCATCAAAGATGATGGGAAATGCCAAACACATTTCATTCAAAAACAGCTTGAGTTTGGATGGACATTCACTTGAACTTATAACGGAAAGTCTCAACTTAACAATGATGAGTGCTGTGTTTCAAAATGTGTCCGTAAGAAGACATGAGAACGTCCACAGCTACAACTATACCAGTGTTGATGCTTGTCTACGTGGAACAAGTATCCCGAAGCAGTTCAAATGTCGAACAGCTACTGACTCCTCCATTACAATTCAACAACTTCCTGATCGATCCATATTGCTGGGATTCATTTACTCGGTGATTCTTTCTCCAGTAGGTGGGAACAGAATGAACAAGGATGGAGCTAGAATACAATGCCAATGCAACTTGGGACAAACCGGTATAAAGACTACATGGCTAAATACGGATGTCACGGACCTGAAATCGGATCACATTTATGTGTGGTATGATCCATTCCATTGTGACAGCATTCTCAAATTTTATGAACCAAAGATTTGTTATGAGTTCTGCGTTACAAACGACACAGGGGAAGTTGATGGTTCAATTGGCATTATTATCAAAGAGTGCGGGGTACGACTAGTGAGTGTTGAAGAATTGGAGAGTGTTTTGCCGGAATTGGACTTGGATTTGGATAAGAAAATGGAATTGAAGAGGGGAGTAAAGAAGGAAATTGAAGCCTCTGACTATAAGACGGATCAGATACCTAATCAGCAACTATACACAAGTCAAAAGAGTTCCAGCGATGGCAAACACGATTTAGTTGAAGAAGACAGTGAGAGTGAAAACCACATTTTTAACGGGGAAAAGAGCATGGAGTCTACTAGTGAGGAAACCAAGAGCATGATCATCTGCAACGGAGCTCCCCTCATTTTGGTGCCTAAGTTGTTTCCGCAGCTAAAAAGTAGAGGAAATGAAGCAAGTGCTGGATTGCATGTACAACTTGTAGAGTCAGTTGCCGGAGAAAACAATTTTGAAGAGACCAAGCAAAAAGGACAAGTTATTGTTCCTGAAAATGAATCAGATGAGGACCCTTTTAATGAACTTTTGAACATTTTAATGGGAAGTCCAAACTCCTCACCGAAAGAAACTTGTTCTACAAGCGACACTGCTGTAAGTACTGCCTTGAATAACCTCGAGTGGCTGTTGAAAAATTCACTCAAGTCCATTCTCTACGACGCAGAGCTACAACAACAATTACACGTCTCTTTGGAATGCATCAAACATGCATCCCGTGAAAAAGTTTCTCCTAATGTTGTGAAGCTTGTCCAGAAAATGATACCCTCTATTAAGAACCTTTTCAAAGACTTTGTCATGATTGAAAAAGTGGTTGAGGATCACATTAATGCTTTGCAACAAAAAGAAAACAAGACGCGGCAAGTGATAGATGGTATGAAACAGAAGAAATCAAAGGAGAAAGAAAAGATTCAGTTCGAGGATGAAGTCAAGCGTCTTGAAGAAGATGGCAGACGGGTTGATGAAAAAATTCAGATTCTTGTTGAGCAAAAGAAAAGTATTGAGCTGGAAAAAACCAAGTTGAAGGAGAGAATGAAAAGATGTGAAGGCGAAAAGAAGGAATTGGATGATGAGGCTAAGAATATGATAACTGAGGCCAAAGAGCTGATGTCGAGGATAAAGAATTCTGAACCTTTGTATGCTGCTGCCCTGTCACAGCAGCAGAAGTTGAATGACAATTGGGAAGGTTTTAGAACAGATTTTGCAGACAACTATGGAAGTAGCCGAGAAGAGTAG 3720 0.4046 MGGIGKTTIAKVLFAKLFAQYDHVCFAKGKESSPSKLLSELLKEEISPSNIVGSTFHMRRLRSRKVFIVLDNVDNLDQFEYLCRGYNDLSNDSRLIITTRDRQLLSERVDWIYKVKQWEDPESLKLFCLEAFQQNLPPRNYEDLSQSAVTYAGGIPLALKLLALHLRSRDIEFWESTFRKLDKHPKEDIHKVLKLSYDGLDALEKKIFLDIAFFFKGENKDRVARILDACGFEASSGIVVLKDKALISISNNLTIQMHDLLQKMGSDIVCNDSGINPAIHTRTRLSGAEARAVIEENKGNSSIEGITLDLSQINDMLLSADTFTKMKALRILKFYAPSNQRCTNTYLNLPTFLEPFSNQLRYFEWNGYPFESLPQPFCAKFLVEIHMPHSNLKQLWQGTEELGMLEGIDLSECKHFERLPDLSKASSLKWVNLSGCESLVDLHPSVLCAESLVTLILDGCTKVRSVRGEKHFIFLEKISVDGCTSLEEFAVSSDLIENLDLSSTGIQTLDLSIGRLQKLKRLNLQSLRLKHLPKELSSVRSIKELKISGSRLMVEKQQLHELFDGLQSIKILHMKDFRNLSELPNNLSVLSKLKELNLDGSNVKRLPESINQLQELETLSLVNCRKLRCLPKLPPLIKQLYAVNCTSLVSVSNLKTLASKMMGNAKHISFKNSLSLDGHSLELITESLNLTMMSAVFQNVSVRRHENVHSYNYTSVDACLRGTSIPKQFKCRTATDSSITIQQLPDRSILLGFIYSVILSPVGGNRMNKDGARIQCQCNLGQTGIKTTWLNTDVTDLKSDHIYVWYDPFHCDSILKFYEPKICYEFCVTNDTGEVDGSIGIIIKECGVRLVSVEELESVLPELDLDLDKKMELKRGVKKEIEASDYKTDQIPNQQLYTSQKSSSDGKHDLVEEDSESENHIFNGEKSMESTSEETKSMIICNGAPLILVPKLFPQLKSRGNEASAGLHVQLVESVAGENNFEETKQKGQVIVPENESDEDPFNELLNILMGSPNSSPKETCSTSDTAVSTALNNLEWLLKNSLKSILYDAELQQQLHVSLECIKHASREKVSPNVVKLVQKMIPSIKNLFKDFVMIEKVVEDHINALQQKENKTRQVIDGMKQKKSKEKEKIQFEDEVKRLEEDGRRVDEKIQILVEQKKSIELEKTKLKERMKRCEGEKKELDDEAKNMITEAKELMSRIKNSEPLYAAALSQQQKLNDNWEGFRTDFADNYGSSREE 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03281 1239 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 526 IPR044974 GO:0006952
Vivi6g03281 1239 Gene3D - 1 112 IPR027417 -
Vivi6g03281 1239 MobiDBLite consensus disorder prediction 892 935 - -
Vivi6g03281 1239 Gene3D - 119 201 IPR042197 -
Vivi6g03281 1239 Pfam Leucine Rich Repeat 381 399 IPR011713 -
Vivi6g03281 1239 Coils Coil 1104 1200 - -
Vivi6g03281 1239 MobiDBLite consensus disorder prediction 905 932 - -
Vivi6g03281 1239 SUPERFAMILY L domain-like 308 651 - -
Vivi6g03281 1239 PRINTS Disease resistance protein signature 611 627 - -
Vivi6g03281 1239 PRINTS Disease resistance protein signature 60 74 - -
Vivi6g03281 1239 PRINTS Disease resistance protein signature 152 166 - -
Vivi6g03281 1239 Pfam NB-ARC domain 1 200 IPR002182 GO:0043531
Vivi6g03281 1239 SUPERFAMILY "Winged helix" DNA-binding domain 188 273 IPR036390 -
Vivi6g03281 1239 Gene3D Ribonuclease Inhibitor 493 677 IPR032675 -
Vivi6g03281 1239 Gene3D Ribonuclease Inhibitor 279 492 IPR032675 -
Vivi6g03281 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 211 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03281 Vivi-Chr6 123607245 123611865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03281 1 866 WRKY Transcription Factor Family AT5G45050 27.970 1.05e-72 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03281 - - vvo:131609832 2343.93