Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03276 ATGGCTCCGTCTTCAGAAACTTCCGTTCGCAAGAACATGATTCCTTCATTTCTCTACGGTTCTTCCCCTAAAACCCTACCGGTTATTCACCAGATCATCAACTCCGGTCCCGCTCCTTCCGCCGCCGCGTCGCCTTCGTTGTCCGGAACTGGATCTTTCATGATTCCTTCTCCCAAGGAATCCGGCAAGATCGAGATGTACTCACCGGCTTTCTATGCTGCTTGTACCGCTGGTGGAATTTTTAGCTGTGGTCTTACTCACATGACCGTCACTCCTCTTGACCTAGTCAAGTGTAATATGCAGATTGACCCTGCCAAGTACAAGAGCATCTCATCAGGGTTTGGAGTATTGCTCAAGGAGCAGGGAGTTAAGGGCTTTTTCCGCGGCTGGGTGCCTACTTTGCTTGGATACAGTGCACAGGGTGCTTGCAAGTTTGGATTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGTCCAGAGTATGCAAACAAGTACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCCGAGGTTATTGCTGATGTTGCACTTTGCCCATTTGAAGCTGTGAAAGTTCGTGTTCAAACTCAACCTGGTTTTGCAAGGGGTCTTGGTGACGGGCTCCCGAAATTTGTCAAATCTGAAGGAGTTTTGGGGCTCTACAAGGGATTAGTGCCTCTATGGGGACGACAAATTCCATACACTATGATGAAATTTGCTTCTTTCGAGACCATTGTTGAGCAAATCTATAAACATGCCATCCCCAGGCCAAAGAGCGAGTGCAGCAAATCTCTGCAACTTGGTGTCAGTTTTGCTGGTGGATATGTTGCTGGTGTACTTTGTGCAATTGTGTCTCATCCTGCGGATAATCTTGTCTCTTTCCTGAACAACGCCAAAGGTGCCACAGTTGGTGATGCTGTTAAGAAGTTTGGTGTGGTGGGTCTTTTCACCCGAGGTCTCCCTCTCCGTATTGTTATGATTGGAACACTTACAGGAGCCCAGTGGGGAATATATGATGCTTTCAAAGTCTTTGTGGGACTGCCAACAACTGGTGGTGCTGCTCCTCCTGCTGAGATCGCAAAGGCATAA 1098 0.4754 MAPSSETSVRKNMIPSFLYGSSPKTLPVIHQIINSGPAPSAAASPSLSGTGSFMIPSPKESGKIEMYSPAFYAACTAGGIFSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYANKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGVLGLYKGLVPLWGRQIPYTMMKFASFETIVEQIYKHAIPRPKSECSKSLQLGVSFAGGYVAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKFGVVGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAAPPAEIAKA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03276 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 268 347 IPR018108 -
Vivi6g03276 365 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 50 358 IPR044677 GO:0005315|GO:1990547
Vivi6g03276 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 70 154 IPR018108 -
Vivi6g03276 365 SUPERFAMILY Mitochondrial carrier 73 343 IPR023395 -
Vivi6g03276 365 Gene3D Mitochondrial carrier domain 70 348 IPR023395 -
Vivi6g03276 365 Pfam Mitochondrial carrier protein 73 156 IPR018108 -
Vivi6g03276 365 Pfam Mitochondrial carrier protein 169 255 IPR018108 -
Vivi6g03276 365 FunFam Phosphate carrier protein, mitochondrial 70 348 - -
Vivi6g03276 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 167 251 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03276 Vivi-Chr6 123539884 123543388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03276 8 363 Chloroplast and Mitochondria Gene Families AT5G14040 79.348 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03276 K15102 - gmx:548006 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03276 6 123539884 123543388 Vivi6g03276 6 123539884 123543388 ECH