Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03253 ATGGTTATTTTTAATAGGACTCATGGCGAGAATAGACTTCTTAACTACGAATTGGGAGATGATTCTCGATGGAAGATTGATCCAAGTGACGAGGTTCTTATCTACGTTTACTTAAGGAAGAAGGTTCATAGACATCCTCTTCCACTTAATAACATTTTTGAATTTGATGTGTTTGAAAGAGAACCTTGGATGCTAGATAGTAGGAATTCATTTAGGGATAGGAAGTATTACTTCTTTGATATTAAGAACCATAGATTTGAAAATATGGATAGAAGACAAGTTGGAAATGGTGAATGGAGGAGTATGGAAAAGAACAAAGAAGTTTCTCTACCAAACAATATGTTCATCGGAAGAAAGAACACCCTTGAATTCTGGAAGATTGAGGGAGATGAACATGTGAAGACTGAATGGGTAATGGATGAGTTTCGAATCACTCCAACCATTCATCCATCTAAGGTTTCATGGTTAGCTGCTTATCGAATTTTTAAGACTATCTTACCGAGCGAAATTGATTTCACATTAGAGGATGAAAATTTATCTCCTCCTCACTCTCCATGA 558 0.3602 MVIFNRTHGENRLLNYELGDDSRWKIDPSDEVLIYVYLRKKVHRHPLPLNNIFEFDVFEREPWMLDSRNSFRDRKYYFFDIKNHRFENMDRRQVGNGEWRSMEKNKEVSLPNNMFIGRKNTLEFWKIEGDEHVKTEWVMDEFRITPTIHPSKVSWLAAYRIFKTILPSEIDFTLEDENLSPPHSP 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03253 185 Gene3D NAC domain 29 165 IPR036093 GO:0003677|GO:0006355
Vivi6g03253 185 SUPERFAMILY NAC domain 27 163 IPR036093 GO:0003677|GO:0006355
Vivi6g03253 185 ProSiteProfiles NAC domain profile. 20 164 IPR003441 GO:0003677|GO:0006355
Vivi6g03253 185 PANTHER NAC TRANSCRIPTION FACTOR 56 26 163 - -
Vivi6g03253 185 Pfam No apical meristem (NAM) protein 25 144 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03253 Vivi-Chr6 122951265 122952829 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03253 24 153 NAC Transcription Factor Family AT3G04070 32.353 5.14e-23 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi6g03253 NAM 5.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03253 - - vvo:131614574 394.815